prot_Ecto-sp8_S_contig921.30586.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig921.30586.1
Unique Nameprot_Ecto-sp8_S_contig921.30586.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length411
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig921.30586.1 vs. uniprot
Match: A0A6H5KJM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM5_9PHAE)

HSP 1 Score: 739 bits (1908), Expect = 3.520e-268
Identity = 380/410 (92.68%), Postives = 393/410 (95.85%), Query Frame = 0 
Query:    1 MSAELSQPDFDPDGTAATSTASEDQRNYRAAYLKKQARRGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNERLPSNCQQLDSSVVWFDEDRTVSTFTSCSGLDDPAIDQLCDCAKYNKVSTGCTWTSASSTRDEIEGLCVAVPVIALTADLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFEDITIALLVVSLSLELVEAYVGYKRWRDPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVYYFSAPGRFRYLSVFGNSLTWLASALTEVLVTAYLVWRLQWWENAEDETADEETWPVLVAAVVGLVVLEVAALLVLWIARVLIARAKSALLTAKDLSLKEPCSGAANGSGAASHKEI 410
            MSAE SQPDFD DGTAAT T SE +RN+RAA LKKQA RGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHN+RLPSNC+QLDSSVVWFDEDRTVSTFTSCSGL+DP IDQLCDCA+Y++VSTGCTWTSASSTRDEIEGLCVAVPVIALT+DLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGF DITIALLVVSLSLELVEAYVGYKRWR+PLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIV+YFSAPGRFRYL V GNSLTWLASALTEV+VTAYLVWRLQWWENA DETADEETWPVLVAAV+GLVVLEVAALLVLWIARVLIARA SALLTAKDLSL EPC G ANG GAASHKEI
Sbjct:    1 MSAESSQPDFDADGTAATGTVSEGKRNHRAACLKKQAIRGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSSVVWFDEDRTVSTFTSCSGLEDPPIDQLCDCARYDRVSTGCTWTSASSTRDEIEGLCVAVPVIALTSDLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWRNPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVFYFSAPGRFRYLGVLGNSLTWLASALTEVVVTAYLVWRLQWWENA-DETADEETWPVLVAAVIGLVVLEVAALLVLWIARVLIARATSALLTAKDLSLGEPCRGMANGGGAASHKEI 409
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig921.30586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJM5_9PHAE3.520e-26892.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 350..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 331..349
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..410
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..330
NoneNo IPR availableTMHMMTMhelixcoord: 311..330
NoneNo IPR availableTMHMMTMhelixcoord: 202..221
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 350..372
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 276..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig921contigEcto-sp8_S_contig921:5112..8074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig921.30586.1mRNA_Ecto-sp8_S_contig921.30586.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig921 5016..9401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig921.30586.1 ID=prot_Ecto-sp8_S_contig921.30586.1|Name=mRNA_Ecto-sp8_S_contig921.30586.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=411bp
MSAELSQPDFDPDGTAATSTASEDQRNYRAAYLKKQARRGMKHAAAFLSL
GLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNERLPSNCQQLDSS
VVWFDEDRTVSTFTSCSGLDDPAIDQLCDCAKYNKVSTGCTWTSASSTRD
EIEGLCVAVPVIALTADLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFE
DITIALLVVSLSLELVEAYVGYKRWRDPLSVRGLVVVASVLEGVGLFSIW
CLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVYYFSAPG
RFRYLSVFGNSLTWLASALTEVLVTAYLVWRLQWWENAEDETADEETWPV
LVAAVVGLVVLEVAALLVLWIARVLIARAKSALLTAKDLSLKEPCSGAAN
GSGAASHKEI*
back to top