prot_Ecto-sp8_S_contig92095.30585.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92095.30585.1
Unique Nameprot_Ecto-sp8_S_contig92095.30585.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length57
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92095.30585.1 vs. uniprot
Match: D7G0K7_ECTSI (HAD-superfamily hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0K7_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.900e-20
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 0 
Query:    1 MFEDSFKNLVTAKSLGMSTVFVQSDTAREEGVGSVELDTVDAVVCDV 47
            MFEDSFKNLVTA SLGM+TVFVQSDTAREEGVGSVELDTVDAVVCD+
Sbjct:  162 MFEDSFKNLVTATSLGMATVFVQSDTAREEGVGSVELDTVDAVVCDL 208
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92095.30585.1 vs. uniprot
Match: A0A836C9Z4_9STRA (HAD-superfamily hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.660e-7
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:    1 MFEDSFKNLVTAKSLGMSTVFVQSDTAREEGVGSVELDTVDAVVCD 46
            +FEDS+KN +TAKS+GM++V + SDTA EEGV    +  VDAVV D
Sbjct:  178 LFEDSYKNCLTAKSVGMTSVLINSDTAIEEGVTEEMMAHVDAVVLD 223
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92095.30585.1 vs. uniprot
Match: A0A7R9T8G8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T8G8_MICPS)

HSP 1 Score: 48.9 bits (115), Expect = 1.080e-5
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0 
Query:    2 FEDSFKNLVTAKSLGMSTVFVQSDTAREEG 31
            FEDS KNL  AK+LGM+TV VQ DTAREEG
Sbjct:   79 FEDSVKNLAAAKTLGMTTVLVQGDTAREEG 108
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92095.30585.1 vs. uniprot
Match: C1N9D1_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N9D1_MICPC)

HSP 1 Score: 48.9 bits (115), Expect = 3.500e-5
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0 
Query:    2 FEDSFKNLVTAKSLGMSTVFVQSDTAREEG 31
            FEDS KNL  AK+LGM+TV VQ DTAREEG
Sbjct:  301 FEDSVKNLAAAKTLGMTTVLVQGDTAREEG 330
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92095.30585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0K7_ECTSI1.900e-2093.62HAD-superfamily hydrolase n=2 Tax=Ectocarpus TaxID... [more]
A0A836C9Z4_9STRA1.660e-758.70HAD-superfamily hydrolase n=1 Tax=Tribonema minus ... [more]
A0A7R9T8G8_MICPS1.080e-576.67Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1N9D1_MICPC3.500e-576.67Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 1..55
e-value: 2.9E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92095contigEcto-sp8_S_contig92095:27..197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92095.30585.1mRNA_Ecto-sp8_S_contig92095.30585.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92095 15..197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92095.30585.1 ID=prot_Ecto-sp8_S_contig92095.30585.1|Name=mRNA_Ecto-sp8_S_contig92095.30585.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=57bp
MFEDSFKNLVTAKSLGMSTVFVQSDTAREEGVGSVELDTVDAVVCDVRNF
LHASPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf