prot_Ecto-sp8_S_contig9208.30580.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9208.30580.1
Unique Nameprot_Ecto-sp8_S_contig9208.30580.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length72
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9208.30580.1 vs. uniprot
Match: D8LSP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP8_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.870e-38
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    2 VVKYWVLFLIASDAGLVTWTMRVAAEFYSKVRRRSPRCWRKTCSVSSRPPLRTRKSLSSFCPKQPEPQAKM 72
            VVKYWV+FLIASDAGLVTWTMRVAAEF+SKVRRRSPRCWRKTCSVSSRPPL TRKSLSSFC +Q EPQAKM
Sbjct:    2 VVKYWVIFLIASDAGLVTWTMRVAAEFFSKVRRRSPRCWRKTCSVSSRPPLSTRKSLSSFCSRQTEPQAKM 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9208.30580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSP8_ECTSI1.870e-3891.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9208contigEcto-sp8_S_contig9208:149..1949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9208.30580.1mRNA_Ecto-sp8_S_contig9208.30580.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9208 149..1949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9208.30580.1 ID=prot_Ecto-sp8_S_contig9208.30580.1|Name=mRNA_Ecto-sp8_S_contig9208.30580.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=72bp
IVVKYWVLFLIASDAGLVTWTMRVAAEFYSKVRRRSPRCWRKTCSVSSRP
PLRTRKSLSSFCPKQPEPQAKM
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