prot_Ecto-sp8_S_contig92024.30573.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92024.30573.1
Unique Nameprot_Ecto-sp8_S_contig92024.30573.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: D8LHH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH0_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.130e-89
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
Query:    1 PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGG VAYQIR DASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN
Sbjct:  286 PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGTVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 439          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A813BCL9_9DINO (FAS4 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BCL9_9DINO)

HSP 1 Score: 190 bits (483), Expect = 5.000e-58
Identity = 98/145 (67.59%), Postives = 116/145 (80.00%), Query Frame = 0
Query:   14 VALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYA----AHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            V ++ +R +LPVC MEQE+ME +  +D ++LCGETGSGK+TQVPQFLYE G+       GLIGVTQPRRVAAV  A+RV  ELG  CG+G  VAYQIR DASGVG+KTRVKFMTDG+LL+EI  DLLLR YS ++LDEAHERNLN
Sbjct:  114 VGVRESRSKLPVCQMEQEVMERILGHDVVVLCGETGSGKTTQVPQFLYEYGFGDKEGTPGLIGVTQPRRVAAVAMAQRVGDELGVGCGQGKRVAYQIRHDASGVGKKTRVKFMTDGILLREIQDDLLLRSYSAIILDEAHERNLN 258          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A7S1CHY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHY0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.070e-57
Identity = 102/151 (67.55%), Postives = 120/151 (79.47%), Query Frame = 0
Query:    8 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAA----HGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            V VKR   +QA R +LPVCGMEQEIME + +ND II+ GETGSGK+TQVPQFLYEAG+ +     G+IGVTQPRRVAAV  A+RVA EL  K GK G V +QIR DA+ VG+ TR+KFMTDG+LL+EI  DLLLRKYS ++LDEAHERNLN
Sbjct:  111 VKVKRDSRIQAQRLELPVCGMEQEIMETILDNDVIIISGETGSGKTTQVPQFLYEAGFGSPDIVKGMIGVTQPRRVAAVAMAQRVAQELNVKQGKNGQVGHQIRHDATTVGKNTRIKFMTDGILLREIQQDLLLRKYSAIVLDEAHERNLN 261          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A812TM39_9DINO (ECM16 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TM39_9DINO)

HSP 1 Score: 195 bits (495), Expect = 1.410e-56
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 0
Query:    8 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHG----LIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            V V R   L AAR +LPVCGMEQEIME V+END +ILCGETGSGK+TQVPQFLYEAG+   G    ++ VTQPRRVAAV  A RVA EL TK G  G V YQ+R DAS V   TRVKF+TDG+LL+E+ SDLLLR+YSV++LDEAHERNLN
Sbjct:  318 VSVPRSAELSAARMELPVCGMEQEIMEGVYENDVLILCGETGSGKTTQVPQFLYEAGFGTAGGTPGMVAVTQPRRVAAVAMANRVATELCTKVGGSGHVGYQVRYDASHVSSHTRVKFLTDGILLREMQSDLLLRRYSVIILDEAHERNLN 468          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A3L6VD53_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VD53_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.050e-56
Identity = 101/154 (65.58%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    5 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            +R V V R  A+Q  R QLPVC  EQEIMEA+  N  +ILCGETGSGK+TQVPQFLYEAGY   G+    IGVTQPRRVAAV TA+RVA EL    GK G+V YQIR D   V + TRVKFMTDG+LL+EI  D LL+KYS++LLDEAHERN+N
Sbjct:  203 QRKVTVTRVEAIQLGRMQLPVCNAEQEIMEAIELNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVPFGKRGSVGYQIRYDNDHVSDSTRVKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 356          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A3R7Y8L7_9STRA (Helicase ATP-binding domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y8L7_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.570e-56
Identity = 101/154 (65.58%), Postives = 117/154 (75.97%), Query Frame = 0
Query:    5 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            +R V V R  A+Q  R QLPVC  EQEIMEA+  N  +ILCGETGSGK+TQVPQFLYEAGY   G+    IGVTQPRRVAAV TA+RVA EL    GK G+V YQIR D   VG+ TR+KFMTDG+LL+EI  D LL+KYS++LLDEAHERN+N
Sbjct:  337 QRKVTVTRVEAIQLGRMQLPVCNAEQEIMEAIESNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVPFGKRGSVGYQIRYDNDHVGDSTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 490          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A482SW22_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SW22_9ARCH)

HSP 1 Score: 199 bits (506), Expect = 2.910e-56
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 0
Query:   10 VKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELG---TKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            V RP+ +QA+R QLPVCGMEQEI+EAVHE+D IILCGETGSGKSTQ+PQFLYEAGY   GL+GVTQPRRVA   T++RV  E+G       +G  V YQIR D+S VG+ T++KFMTDG+LL+EIT D+LLR+YSV++LDEAHERN+N
Sbjct:  409 VSRPMDIQASRMQLPVCGMEQEIIEAVHEHDVIILCGETGSGKSTQIPQFLYEAGYTKRGLVGVTQPRRVAVTSTSDRVNYEMGQINNDSREGRLVGYQIRYDSSTVGKVTKIKFMTDGILLREITQDILLRQYSVIILDEAHERNVN 556          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A6G0XDB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDB3_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.310e-55
Identity = 105/152 (69.08%), Postives = 117/152 (76.97%), Query Frame = 0
Query:    5 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAH--GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            KR V V R   +Q AR QLPVC  EQEIMEA+  +  +ILCGETGSGK+TQVPQFLYEAGY     G+IGVTQPRRVAAV TA+RVA EL    GK GAV YQIR D   VGEKT VKFMTDG+LL+EI  D LL+KYS+VLLDEAHERN+N
Sbjct:  310 KRRVHVNRKDDIQLARMQLPVCSSEQEIMEAIENHSVVILCGETGSGKTTQVPQFLYEAGYGTERPGMIGVTQPRRVAAVSTAQRVATELNVDFGKTGAVGYQIRYDNEHVGEKTIVKFMTDGILLKEIQQDFLLKKYSIVLLDEAHERNVN 461          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A485L2E9_9STRA (Aste57867_15113 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2E9_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.610e-54
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 0
Query:    8 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            V V+R  ++Q AR QLPVC  EQEIMEA+  +  +ILCGETGSGK+TQVPQFLYEAGY   G+    IGVTQPRRVAAV TAERVA EL    G+ G V YQIR D   VG+KTRVKFMTDG+LL+EI +D LL+KYSVVLLDEAHERN+N
Sbjct:  314 VHVRRVESIQLARMQLPVCSSEQEIMEAIETHSVVILCGETGSGKTTQVPQFLYEAGYGTEGMHPGMIGVTQPRRVAAVSTAERVATELNVAFGRHGTVGYQIRYDNEHVGDKTRVKFMTDGILLKEIQTDFLLKKYSVVLLDEAHERNVN 464          
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A1V9YYF6_9STRA (ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYF6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.220e-54
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 0
Query:    5 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAH----GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 154
            K+ VPV R   +Q AR QLPVC  EQEIMEA+  N  +ILCGETGSGK+TQVPQFLYE+GY       G+IGVTQPRRVAAV TA+RVA EL  + GK G+V YQIR D   VG  TR+KFMTDG+LL+EI  D LL+KYS++LLDEAHERN+N
Sbjct:  238 KKLVPVHRKEDIQLARMQLPVCSSEQEIMEAISLNPVVILCGETGSGKTTQVPQFLYESGYGFDEHNPGMIGVTQPRRVAAVSTAQRVATELNVEFGKNGSVGYQIRYDNEHVGNNTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 391          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHH0_ECTSI1.130e-8998.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A813BCL9_9DINO5.000e-5867.59FAS4 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A7S1CHY0_9STRA1.070e-5767.55Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A812TM39_9DINO1.410e-5668.21ECM16 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A3L6VD53_9STRA2.050e-5665.58Helicase ATP-binding domain-containing protein n=1... [more]
A0A3R7Y8L7_9STRA2.570e-5665.58Helicase ATP-binding domain-containing protein n=1... [more]
A0A482SW22_9ARCH2.910e-5667.57DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
A0A6G0XDB3_9STRA6.310e-5569.08Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485L2E9_9STRA1.610e-5468.21Aste57867_15113 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YYF6_9STRA2.220e-5465.58ATP-dependent RNA helicase (Fragment) n=1 Tax=Thra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..154
e-value: 3.1E-56
score: 192.1
NoneNo IPR availablePANTHERPTHR18934:SF99ATP-DEPENDENT RNA HELICASE DHX37-RELATEDcoord: 7..154
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 7..154
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 141..150
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 33..154
score: 14.388
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92024contigEcto-sp8_S_contig92024:160..621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92024.30573.1mRNA_Ecto-sp8_S_contig92024.30573.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92024 160..621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92024.30573.1 ID=prot_Ecto-sp8_S_contig92024.30573.1|Name=mRNA_Ecto-sp8_S_contig92024.30573.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=154bp
PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGS
GKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGG
AVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHE
RNLN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase