mRNA_Ecto-sp8_S_contig92024.30573.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: D8LHH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH0_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.130e-89 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1
Query: 1 PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGG VAYQIR DASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN
Sbjct: 286 PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGTVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 439
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A813BCL9_9DINO (FAS4 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BCL9_9DINO) HSP 1 Score: 190 bits (483), Expect = 5.000e-58 Identity = 98/145 (67.59%), Postives = 116/145 (80.00%), Query Frame = 1
Query: 40 VALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYA----AHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
V ++ +R +LPVC MEQE+ME + +D ++LCGETGSGK+TQVPQFLYE G+ GLIGVTQPRRVAAV A+RV ELG CG+G VAYQIR DASGVG+KTRVKFMTDG+LL+EI DLLLR YS ++LDEAHERNLN
Sbjct: 114 VGVRESRSKLPVCQMEQEVMERILGHDVVVLCGETGSGKTTQVPQFLYEYGFGDKEGTPGLIGVTQPRRVAAVAMAQRVGDELGVGCGQGKRVAYQIRHDASGVGKKTRVKFMTDGILLREIQDDLLLRSYSAIILDEAHERNLN 258
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A7S1CHY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHY0_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.070e-57 Identity = 102/151 (67.55%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 22 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAA----HGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
V VKR +QA R +LPVCGMEQEIME + +ND II+ GETGSGK+TQVPQFLYEAG+ + G+IGVTQPRRVAAV A+RVA EL K GK G V +QIR DA+ VG+ TR+KFMTDG+LL+EI DLLLRKYS ++LDEAHERNLN
Sbjct: 111 VKVKRDSRIQAQRLELPVCGMEQEIMETILDNDVIIISGETGSGKTTQVPQFLYEAGFGSPDIVKGMIGVTQPRRVAAVAMAQRVAQELNVKQGKNGQVGHQIRHDATTVGKNTRIKFMTDGILLREIQQDLLLRKYSAIVLDEAHERNLN 261
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A812TM39_9DINO (ECM16 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TM39_9DINO) HSP 1 Score: 195 bits (495), Expect = 1.410e-56 Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 22 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHG----LIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
V V R L AAR +LPVCGMEQEIME V+END +ILCGETGSGK+TQVPQFLYEAG+ G ++ VTQPRRVAAV A RVA EL TK G G V YQ+R DAS V TRVKF+TDG+LL+E+ SDLLLR+YSV++LDEAHERNLN
Sbjct: 318 VSVPRSAELSAARMELPVCGMEQEIMEGVYENDVLILCGETGSGKTTQVPQFLYEAGFGTAGGTPGMVAVTQPRRVAAVAMANRVATELCTKVGGSGHVGYQVRYDASHVSSHTRVKFLTDGILLREMQSDLLLRRYSVIILDEAHERNLN 468
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A3L6VD53_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VD53_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.050e-56 Identity = 101/154 (65.58%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 13 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
+R V V R A+Q R QLPVC EQEIMEA+ N +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TA+RVA EL GK G+V YQIR D V + TRVKFMTDG+LL+EI D LL+KYS++LLDEAHERN+N
Sbjct: 203 QRKVTVTRVEAIQLGRMQLPVCNAEQEIMEAIELNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVPFGKRGSVGYQIRYDNDHVSDSTRVKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 356
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A3R7Y8L7_9STRA (Helicase ATP-binding domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y8L7_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.570e-56 Identity = 101/154 (65.58%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 13 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
+R V V R A+Q R QLPVC EQEIMEA+ N +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TA+RVA EL GK G+V YQIR D VG+ TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+N
Sbjct: 337 QRKVTVTRVEAIQLGRMQLPVCNAEQEIMEAIESNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVPFGKRGSVGYQIRYDNDHVGDSTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 490
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A482SW22_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SW22_9ARCH) HSP 1 Score: 199 bits (506), Expect = 2.910e-56 Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 28 VKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELG---TKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
V RP+ +QA+R QLPVCGMEQEI+EAVHE+D IILCGETGSGKSTQ+PQFLYEAGY GL+GVTQPRRVA T++RV E+G +G V YQIR D+S VG+ T++KFMTDG+LL+EIT D+LLR+YSV++LDEAHERN+N
Sbjct: 409 VSRPMDIQASRMQLPVCGMEQEIIEAVHEHDVIILCGETGSGKSTQIPQFLYEAGYTKRGLVGVTQPRRVAVTSTSDRVNYEMGQINNDSREGRLVGYQIRYDSSTVGKVTKIKFMTDGILLREITQDILLRQYSVIILDEAHERNVN 556
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A6G0XDB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDB3_9STRA) HSP 1 Score: 195 bits (496), Expect = 6.310e-55 Identity = 105/152 (69.08%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 13 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAH--GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
KR V V R +Q AR QLPVC EQEIMEA+ + +ILCGETGSGK+TQVPQFLYEAGY G+IGVTQPRRVAAV TA+RVA EL GK GAV YQIR D VGEKT VKFMTDG+LL+EI D LL+KYS+VLLDEAHERN+N
Sbjct: 310 KRRVHVNRKDDIQLARMQLPVCSSEQEIMEAIENHSVVILCGETGSGKTTQVPQFLYEAGYGTERPGMIGVTQPRRVAAVSTAQRVATELNVDFGKTGAVGYQIRYDNEHVGEKTIVKFMTDGILLKEIQQDFLLKKYSIVLLDEAHERNVN 461
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A485L2E9_9STRA (Aste57867_15113 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2E9_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.610e-54 Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 22 VPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
V V+R ++Q AR QLPVC EQEIMEA+ + +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TAERVA EL G+ G V YQIR D VG+KTRVKFMTDG+LL+EI +D LL+KYSVVLLDEAHERN+N
Sbjct: 314 VHVRRVESIQLARMQLPVCSSEQEIMEAIETHSVVILCGETGSGKTTQVPQFLYEAGYGTEGMHPGMIGVTQPRRVAAVSTAERVATELNVAFGRHGTVGYQIRYDNEHVGDKTRVKFMTDGILLKEIQTDFLLKKYSVVLLDEAHERNVN 464
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Match: A0A1V9YYF6_9STRA (ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYF6_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.220e-54 Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 13 KRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAH----GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRSDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLN 462
K+ VPV R +Q AR QLPVC EQEIMEA+ N +ILCGETGSGK+TQVPQFLYE+GY G+IGVTQPRRVAAV TA+RVA EL + GK G+V YQIR D VG TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+N
Sbjct: 238 KKLVPVHRKEDIQLARMQLPVCSSEQEIMEAISLNPVVILCGETGSGKTTQVPQFLYESGYGFDEHNPGMIGVTQPRRVAAVSTAQRVATELNVEFGKNGSVGYQIRYDNEHVGNNTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVN 391 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92024.30573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig92024.30573.1 >prot_Ecto-sp8_S_contig92024.30573.1 ID=prot_Ecto-sp8_S_contig92024.30573.1|Name=mRNA_Ecto-sp8_S_contig92024.30573.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=154bp PPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSback to top mRNA from alignment at Ecto-sp8_S_contig92024:160..621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig92024.30573.1 ID=mRNA_Ecto-sp8_S_contig92024.30573.1|Name=mRNA_Ecto-sp8_S_contig92024.30573.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=462bp|location=Sequence derived from alignment at Ecto-sp8_S_contig92024:160..621+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig92024:160..621+ >mRNA_Ecto-sp8_S_contig92024.30573.1 ID=mRNA_Ecto-sp8_S_contig92024.30573.1|Name=mRNA_Ecto-sp8_S_contig92024.30573.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=462bp|location=Sequence derived from alignment at Ecto-sp8_S_contig92024:160..621+ (Ectocarpus species8 EcLAC_412)back to top |