prot_Ecto-sp8_S_contig917.30513.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig917.30513.1
Unique Nameprot_Ecto-sp8_S_contig917.30513.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length538
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig917.30513.1 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 780 bits (2013), Expect = 6.550e-281
Identity = 427/460 (92.83%), Postives = 438/460 (95.22%), Query Frame = 0 
Query:   77 MNETGSGTVTMWEFREYFDLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFDFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDIDAWSAFVSANLQIQAPAVHTRLVLQKKVLGVGFWTHCLRKSMTIFLGRTATVEQILSAHVSPNVLEELAQDRRLELDHDDSTQFNLRVIRRTGPFPQRRKYRDTAGKRLRAKAAAAVGAVAADNVKKFATLTVREVFERVTVPAGQDATWEEPKPPSTLQALMASLTAIVERAPPDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGAPPDALALLKNRPGIDGVPLGSPAAAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTVKKGGSPAASSPGGSRAVGGGKTTLSRTGKELVGAGEVGCVGVRGGGAGRG 536
            MNETG+GTVT+WEFREYF+LPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEF+FMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMD+DAWSAFVSAN QIQAPAVHTRLVLQKKVLGVGFWTHCL K+MTIFLGRTATVEQILSAHVSPN+LEELAQDRRLELDHDDSTQFNLRVIRRTGPFP+RRKYRD AGK+LRAKAAAAVGAVAADNVKKFATLTVRE FERVTVPAG+DATWE+PKPPSTLQALMASLTAIVERAPP GAXXXXXXXXXXXXXXXXXXXXXX       KKGAPPDALALLKNRPGIDG PLGSPA APSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAART KKG SPAASSP GSRAVGGGK TLSRTGKELVGAGEVGCVGV GG  G G
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKRKNNKKGAPPDALALLKNRPGIDGAPLGSPAVAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAKKGVSPAASSPEGSRAVGGGKITLSRTGKELVGAGEVGCVGVPGGEGGTG 460
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig917.30513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW22_ECTSI6.550e-28192.83EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 141..158
e-value: 0.075
score: 12.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 97..132
score: 7.763
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 141..168
score: 9.074
NoneNo IPR availableGENE3D1.10.238.10coord: 50..207
e-value: 3.1E-19
score: 71.1
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 63..162
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 146..158
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 110..122
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 51..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig917contigEcto-sp8_S_contig917:2979..6621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig917.30513.1mRNA_Ecto-sp8_S_contig917.30513.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig917 2938..6621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig917.30513.1 ID=prot_Ecto-sp8_S_contig917.30513.1|Name=mRNA_Ecto-sp8_S_contig917.30513.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=538bp
MGAAASLVTEDQRASLHVAVLQVLPSVVYALEERRFKAGCFYETPEFAQQ
KELCPIFAALGLHEWSISHLWRHFRQMNETGSGTVTMWEFREYFDLPDDR
STTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHN
GKIGADEFDFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDIDA
WSAFVSANLQIQAPAVHTRLVLQKKVLGVGFWTHCLRKSMTIFLGRTATV
EQILSAHVSPNVLEELAQDRRLELDHDDSTQFNLRVIRRTGPFPQRRKYR
DTAGKRLRAKAAAAVGAVAADNVKKFATLTVREVFERVTVPAGQDATWEE
PKPPSTLQALMASLTAIVERAPPDGAPAAGSNASPSLSRSPASRSPTSSK
KRKNKKKGAPPDALALLKNRPGIDGVPLGSPAAAPSSPTGSAVDADPAIA
NAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTVKKGGSPAASSPGGS
RAVGGGKTTLSRTGKELVGAGEVGCVGVRGGGAGRGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR028846Recoverin
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair