prot_Ecto-sp8_S_contig91483.30475.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig91483.30475.1
Unique Nameprot_Ecto-sp8_S_contig91483.30475.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 8.280e-35
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 69
            MATNASVLVGANNKGTVFVFSPGGDTK+  FKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD
Sbjct:  168 MATNASVLVGANNKGTVFVFSPGGDTKS--FKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 234          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.710e-16
Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    2 ATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTK-TWTHQRTL 79
            AT+ASV+V A + G VFVF PG D   R +   +  KAH+ YLLKCVLSPNV +LVTT +DKT KVW+    W  ++TL
Sbjct:  169 ATDASVIVAAGSHGRVFVFEPGRD--GRSYALASHFKAHEGYLLKCVLSPNVRQLVTTGSDKTAKVWNVGGNWPLEKTL 245          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A075AZE2_ROZAC (WD repeat-containing protein wat1 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AZE2_ROZAC)

HSP 1 Score: 76.3 bits (186), Expect = 7.890e-15
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 80
            +A++ S LV ANN G  FV+       +   +    I AHDTY+ KCVLSP+V+KL T+SAD T+K+W T ++ H++TLV
Sbjct:  143 VASDGSFLVAANNHGYCFVWKMSNGQDSTDLQPITRIHAHDTYVTKCVLSPDVKKLATSSADGTIKIWATDSFLHEKTLV 222          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A7S3H1Y8_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1Y8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.760e-14
Identity = 34/79 (43.04%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 79
            +A +AS +   ++KG VFV++P  +   +G   T + +AH+ YLLKCV+SP++  + TTSADKT+K+W+T +W  + TL
Sbjct:  170 IAYDASFIAAGSHKGRVFVYTPDAE---KGLVLTKDYQAHEDYLLKCVISPDLRSIATTSADKTIKLWETSSWNLETTL 245          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A7S3VMH4_DUNTE (Target of rapamycin complex subunit LST8 n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VMH4_DUNTE)

HSP 1 Score: 72.4 bits (176), Expect = 2.900e-13
Identity = 34/81 (41.98%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 80
            +A + +++V ANN GT +V+    G   +  F+  ++++AH TY+LKC++SP+ ++L TTSADKT+K+W+ +T+T  RTL+
Sbjct:  168 VALDGTMIVAANNNGTCYVWRMMRGGAHSTHFEPLHKLRAHPTYILKCLISPDSQQLATTSADKTIKLWNLETFTLDRTLL 248          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A059LPD8_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LPD8_9CHLO)

HSP 1 Score: 69.7 bits (169), Expect = 3.630e-12
Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 79
            +A ++S+LV +NN GT +++    G   +  F+  +++KAH  ++LKC+LSP+V +L TTSADKTVK+W+   +T  RTL
Sbjct:  226 VAVDSSLLVASNNSGTCYIWRALRGTYHSTHFEPLHKLKAHQGFVLKCLLSPDVRQLATTSADKTVKIWNLDGFTLDRTL 305          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A6A7G6M2_9CRUS (WD40 repeat-like superfamily protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6M2_9CRUS)

HSP 1 Score: 68.9 bits (167), Expect = 5.130e-12
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVW 68
            +A++ S++V ANN+GT+FV+      +   F+  ++I AH TY LKCVLSP+ + L TTSADKT+K+W
Sbjct:  169 IASDGSIVVAANNRGTIFVWKTKNGAQ---FEPVHKIDAHSTYCLKCVLSPDCKYLATTSADKTIKLW 233          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: E1ZL40_CHLVA (Target of rapamycin complex subunit LST8 n=3 Tax=Chlorella clade TaxID=2511126 RepID=E1ZL40_CHLVA)

HSP 1 Score: 67.8 bits (164), Expect = 1.420e-11
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVF-SPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 79
            +A + S++V ANN GT +V+ +  G      F+  ++++AH  Y+LKC+LSP+V +L TTS+DKTVK+W+   +T  RTL
Sbjct:  169 VAMDGSLVVAANNSGTCYVWRAMRGSYLTTHFEPLHKLRAHQGYVLKCMLSPDVRQLATTSSDKTVKLWNLDGFTLDRTL 248          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A8JDD2_CHLRE (Target of rapamycin complex subunit LST8 n=9 Tax=Chlamydomonadales TaxID=3042 RepID=A8JDD2_CHLRE)

HSP 1 Score: 66.6 bits (161), Expect = 3.790e-11
Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 80
            +A + +++V ANN GT +V+    G +    F+  +++KAH   +LKC++SP+ ++L TTSADKTVK+W+   +T  RTLV
Sbjct:  170 VALDGTMIVAANNNGTCYVWRMMRGASLTTHFEPLHKLKAHSNIILKCLISPDCQQLATTSADKTVKLWNLDGFTLDRTLV 250          
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A8J4G6I5_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G6I5_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 2.950e-10
Identity = 32/81 (39.51%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 80
            +A + +++V ANN GT +V+    G +    F+  +++KAH   +LKC++SP+ ++L TTSADKTVK+W+   +   RTL+
Sbjct:   96 VALDGTMIVAANNNGTCYVWRMMRGASMTTHFEPLHKLKAHTNIILKCLISPDCQQLATTSADKTVKLWNLDGFVLDRTLL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI8.280e-3595.65WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA2.710e-1654.43WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A075AZE2_ROZAC7.890e-1546.25WD repeat-containing protein wat1 n=1 Tax=Rozella ... [more]
A0A7S3H1Y8_9STRA2.760e-1443.04Target of rapamycin complex subunit LST8 n=1 Tax=S... [more]
A0A7S3VMH4_DUNTE2.900e-1341.98Target of rapamycin complex subunit LST8 n=1 Tax=D... [more]
A0A059LPD8_9CHLO3.630e-1243.75Uncharacterized protein n=1 Tax=Helicosporidium sp... [more]
A0A6A7G6M2_9CRUS5.130e-1248.53WD40 repeat-like superfamily protein n=1 Tax=Hiron... [more]
E1ZL40_CHLVA1.420e-1143.75Target of rapamycin complex subunit LST8 n=3 Tax=C... [more]
A8JDD2_CHLRE3.790e-1141.98Target of rapamycin complex subunit LST8 n=9 Tax=C... [more]
A0A8J4G6I5_9CHLO2.950e-1039.51Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 30..69
e-value: 2.7E-4
score: 30.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 37..78
score: 12.146
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..80
e-value: 5.4E-13
score: 50.5
IPR037588Target of rapamycin complex subunit LST8PANTHERPTHR19842G BETA-LIKE PROTEIN GBLcoord: 2..79
NoneNo IPR availablePANTHERPTHR19842:SF0TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8coord: 2..79
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 56..70
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 37..78
score: 11.445
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig91483contigEcto-sp8_S_contig91483:47..591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig91483.30475.1mRNA_Ecto-sp8_S_contig91483.30475.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig91483 47..606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig91483.30475.1 ID=prot_Ecto-sp8_S_contig91483.30475.1|Name=mRNA_Ecto-sp8_S_contig91483.30475.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=80bp
MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLS
PNVEKLVTTSADKTVKVWDTKTWTHQRTLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037588MLST8
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf