mRNA_Ecto-sp8_S_contig91483.30475.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.050e-37 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 222
IQSLSMATNASVLVGANNKGTVFVFSPGGDTK+ FKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD
Sbjct: 163 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKS--FKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 234
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.160e-18 Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTK-TWTHQRTL 252
IQS+S AT+ASV+V A + G VFVF PG D R + + KAH+ YLLKCVLSPNV +LVTT +DKT KVW+ W ++TL
Sbjct: 163 IQSISAATDASVIVAAGSHGRVFVFEPGRD--GRSYALASHFKAHEGYLLKCVLSPNVRQLVTTGSDKTAKVWNVGGNWPLEKTL 245
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A7S3H1Y8_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1Y8_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.330e-16 Identity = 37/84 (44.05%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 252
I+S+S+A +AS + ++KG VFV++P + +G T + +AH+ YLLKCV+SP++ + TTSADKT+K+W+T +W + TL
Sbjct: 165 IRSISIAYDASFIAAGSHKGRVFVYTPDAE---KGLVLTKDYQAHEDYLLKCVISPDLRSIATTSADKTIKLWETSSWNLETTL 245
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A075AZE2_ROZAC (WD repeat-containing protein wat1 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AZE2_ROZAC) HSP 1 Score: 78.6 bits (192), Expect = 1.300e-15 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 255
+ +S+A++ S LV ANN G FV+ + + I AHDTY+ KCVLSP+V+KL T+SAD T+K+W T ++ H++TLV
Sbjct: 138 VNCVSVASDGSFLVAANNHGYCFVWKMSNGQDSTDLQPITRIHAHDTYVTKCVLSPDVKKLATSSADGTIKIWATDSFLHEKTLV 222
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A7S3VMH4_DUNTE (Target of rapamycin complex subunit LST8 n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VMH4_DUNTE) HSP 1 Score: 77.0 bits (188), Expect = 6.970e-15 Identity = 36/86 (41.86%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 255
++SL++A + +++V ANN GT +V+ G + F+ ++++AH TY+LKC++SP+ ++L TTSADKT+K+W+ +T+T RTL+
Sbjct: 163 VRSLTVALDGTMIVAANNNGTCYVWRMMRGGAHSTHFEPLHKLRAHPTYILKCLISPDSQQLATTSADKTIKLWNLETFTLDRTLL 248
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A059LPD8_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LPD8_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 9.620e-14 Identity = 37/85 (43.53%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 252
++SL++A ++S+LV +NN GT +++ G + F+ +++KAH ++LKC+LSP+V +L TTSADKTVK+W+ +T RTL
Sbjct: 221 VRSLTVAVDSSLLVASNNSGTCYIWRALRGTYHSTHFEPLHKLKAHQGFVLKCLLSPDVRQLATTSADKTVKIWNLDGFTLDRTL 305
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A6A7G6M2_9CRUS (WD40 repeat-like superfamily protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6M2_9CRUS) HSP 1 Score: 72.8 bits (177), Expect = 2.390e-13 Identity = 35/73 (47.95%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVW 219
I+S+++A++ S++V ANN+GT+FV+ + F+ ++I AH TY LKCVLSP+ + L TTSADKT+K+W
Sbjct: 164 IRSVTIASDGSIVVAANNRGTIFVWKTKNGAQ---FEPVHKIDAHSTYCLKCVLSPDCKYLATTSADKTIKLW 233
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: E1ZL40_CHLVA (Target of rapamycin complex subunit LST8 n=3 Tax=Chlorella clade TaxID=2511126 RepID=E1ZL40_CHLVA) HSP 1 Score: 72.4 bits (176), Expect = 3.520e-13 Identity = 37/85 (43.53%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVF-SPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 252
++SL++A + S++V ANN GT +V+ + G F+ ++++AH Y+LKC+LSP+V +L TTS+DKTVK+W+ +T RTL
Sbjct: 164 VRSLTVAMDGSLVVAANNSGTCYVWRAMRGSYLTTHFEPLHKLRAHQGYVLKCMLSPDVRQLATTSSDKTVKLWNLDGFTLDRTL 248
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A8JDD2_CHLRE (Target of rapamycin complex subunit LST8 n=9 Tax=Chlamydomonadales TaxID=3042 RepID=A8JDD2_CHLRE) HSP 1 Score: 71.2 bits (173), Expect = 9.460e-13 Identity = 36/86 (41.86%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSP-GGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 255
++SL++A + +++V ANN GT +V+ G + F+ +++KAH +LKC++SP+ ++L TTSADKTVK+W+ +T RTLV
Sbjct: 165 VRSLTVALDGTMIVAANNNGTCYVWRMMRGASLTTHFEPLHKLKAHSNIILKCLISPDCQQLATTSADKTVKLWNLDGFTLDRTLV 250
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Match: A0A8H7PTJ5_9FUNG (Target of rapamycin complex subunit LST8 n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7PTJ5_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 3.900e-12 Identity = 34/87 (39.08%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 1 IQSLSMATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKT--WTHQRTLV 255
++S+++A++ S+LV ANNKG +V+ ++ K ++ AH+ Y+ +C+LSP+ + L T SADKTVK+W+T+ +T ++TLV
Sbjct: 192 LRSVTVASDGSMLVAANNKGNCYVWQLPKGNESSDLKPITKLNAHNEYITRCLLSPDTKHLATCSADKTVKIWNTENGKFTLEKTLV 278 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91483.30475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig91483.30475.1 >prot_Ecto-sp8_S_contig91483.30475.1 ID=prot_Ecto-sp8_S_contig91483.30475.1|Name=mRNA_Ecto-sp8_S_contig91483.30475.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=80bp MATNASVLVGANNKGTVFVFSPGGDTKARGFKKTNEIKAHDTYLLKCVLSback to top mRNA from alignment at Ecto-sp8_S_contig91483:47..606- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig91483.30475.1 ID=mRNA_Ecto-sp8_S_contig91483.30475.1|Name=mRNA_Ecto-sp8_S_contig91483.30475.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=560bp|location=Sequence derived from alignment at Ecto-sp8_S_contig91483:47..606- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig91483:47..606- >mRNA_Ecto-sp8_S_contig91483.30475.1 ID=mRNA_Ecto-sp8_S_contig91483.30475.1|Name=mRNA_Ecto-sp8_S_contig91483.30475.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=240bp|location=Sequence derived from alignment at Ecto-sp8_S_contig91483:47..606- (Ectocarpus species8 EcLAC_412)back to top |