prot_Ecto-sp8_S_contig913.30444.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig913.30444.1
Unique Nameprot_Ecto-sp8_S_contig913.30444.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length437
Homology
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 552 bits (1423), Expect = 4.250e-193
Identity = 410/436 (94.04%), Postives = 413/436 (94.72%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXXXTEVEKASPQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPVPAADAENGEAEEXXXXXXEAGQGGEGKEXXXXXXXXXXXXXXXXXMVDDEGGEXAAAETAEETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYK 436
            MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGT LPNLSCLILTNNKLSTLAELKGLGTC KLTMLSLLHNEVVNKQYYRLYMINL+PSLKQLDFQKVTVKERESA RLARSQAGQAMIQDVA+QAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXXXTEVE ASPQTA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPVP ADA NGEAEE      EAG+GGEGK XXXXXXXXXXXXXXXXX        X AAETAEETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYK
Sbjct:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXXXTEVEMASPQTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPVPGADAGNGEAEEEPPATSEAGRGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAETAEETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYK 436          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A6H5L3Q9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q9_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 9.430e-88
Identity = 260/340 (76.47%), Postives = 267/340 (78.53%), Query Frame = 0
Query:   98 KLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXXXTEVEKASPQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPVPAADAENGEAEEXXXXXXEAGQGGEGKEXXXXXXXXXXXXXXXXXMVDDEGGEXAAAETAEETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYKV 437
            +LSTLAELKGLGTC KLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVK            AGQAMIQDVA+QAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXX  TEVE ASPQTA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAP   A +  G A+         G+GG                      V DEGGE              PAETGEGEGDMEQE+GGGPKLSEA+IKSYKV
Sbjct:    2 QLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVK------------AGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXT-TEVEMASPQTASPHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPE--ASSAKGGAD---------GRGG------------------GDARVGDEGGEEXXXXXXXXXXXXXPAETGEGEGDMEQEDGGGPKLSEADIKSYKV 299          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 241 bits (615), Expect = 5.210e-71
Identity = 134/230 (58.26%), Postives = 168/230 (73.04%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 230
            MRLTAD+I+ ARAS+N   ERELDLRG+KIP+IEN+GVTQDQFD +DFSDNEI+KLDNFPR  RL++LLL NN +++I +D+G  LPNLSCL+LTNN +S L+EL  LG C +LTMLSLL N V   Q+YRLY+I+ +PSLK LDF KV  +ER  A RL +S AG+AM +D+A QA   KTF PG  A     LT   R      I +A T EEI+ L + ++AGI P+
Sbjct:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQA---KTFVPGGAA--RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPA 225          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A7S3XKJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKJ1_HETAK)

HSP 1 Score: 229 bits (583), Expect = 3.800e-67
Identity = 126/235 (53.62%), Postives = 169/235 (71.91%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQK-LTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYK 234
            MRLTAD+I+ A A+INPC ERELDLRGYKIP+IEN+G TQD FD +DFSDNEIKKL+NFPR +RL++LL  NNH+SKI+E +   +PNLS L     ++  LAEL  L    KLT+LSLL N VV +Q+YRLY+I+  P+LK LDF+KV  +ER+ AARL +S+AGQ M  DV ++    KTF  G     E+K LT++ + +  + I  ATT EE++ L ++++AGI+P+   K
Sbjct:    1 MRLTADVILRADATINPCKERELDLRGYKIPVIENVGATQDMFDTIDFSDNEIKKLENFPRMERLTTLLFNNNHISKIAESIKDQVPNLSTLXXXXXRIQHLAELDSLQGLRKLTLLSLLENPVVRRQHYRLYVIHRCPALKYLDFRKVKQQERQEAARLFKSKAGQQMQDDVQKEI---KTFQAGEKQEREKKRLTEDQKNLIREAIKNATTPEEVDKLERQLKAGIMPNLAQK 232          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A7S2G9L1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9L1_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.270e-62
Identity = 123/240 (51.25%), Postives = 162/240 (67.50%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPG----------APAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 230
            +RLTAD+  HA   +N C ERELDLRG KIP IEN+GVTQDQFD +DF+DNEIK++DNFP +KRLS+LLL NNHV+++S  L   LPNL CL         L+E+  L  C KLTMLS ++N ++ +Q+YRLY+I  +P LK LDF KV   ERE AA+L RS AG+ M QDV  ++   KTFTPG          A    EQK  D+ RA+    IA A+T EE++ + ++++AG+IP+
Sbjct:    2 VRLTADVFAHAVPRMNCCQERELDLRGLKIPAIENVGVTQDQFDVLDFTDNEIKRVDNFPTFKRLSTLLLSNNHVTRLSPTLSEQLPNLDCLXXXXXXXXNLSEVDNLIGCTKLTMLSFVNNPIIRRQHYRLYVIAKLPQLKALDFVKVKAIEREEAAKLFRSAAGRLMQQDVEAES---KTFTPGEDIPSTTNPMANLTAEQK--DQVRAV----IAAASTPEEVDRIERQLKAGVIPT 232          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A3Q3N132_9LABR (Small nuclear ribonucleoprotein polypeptide A' n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3N132_9LABR)

HSP 1 Score: 210 bits (535), Expect = 3.400e-62
Identity = 116/239 (48.54%), Postives = 162/239 (67.78%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 236
            ++LTA++I  A    NP  +RELDLRGYKIP++ENLG T DQFD +DFSDNEI+KLD FP  KRL +LL+ NN + ++ E+L  +LP L+ LILTNN +  L +L  L T   LT+LSLL N V NK++YRLYMIN +P ++ LDFQKV  KER+ A ++ + + G  + +D+A+   + KTFTPG PA  E+K T   +A      + IA A+++ E+E L   +QAG IP  + ++G
Sbjct:    2 VKLTAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTVDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRVGENLEQSLPCLTELILTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYMINKIPQIRVLDFQKVKQKERQEAEKMFKGKRGAQLAKDIAK---RTKTFTPGVPAQLEKKKTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIPGRDLREG 237          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A7S2F7F7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7F7_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.420e-61
Identity = 117/234 (50.00%), Postives = 163/234 (69.66%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAE----KAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 230
            MRLT+D++++A A +NPC ERELDLRG KIP IEN+GVTQD +D +DF+DNEIKKL+NFP  KRLS LLL NNHV  I+ ++   +P+L  L+LTNNK++ L+E+  L  CA LT LSLL N V+ +Q+YR Y+I+ +P LK LDF K+  KER+ A RL RS AG+ M +DV +  E    +A+T T         +L +  RA     IA A+T +EI+ + ++++AGI+P+
Sbjct:    1 MRLTSDVLLNAHARLNPCSERELDLRGLKIPAIENIGVTQDLYDTLDFTDNEIKKLENFPNTKRLSCLLLSNNHVKIINPEISEKIPSLRTLVLTNNKITNLSEVDNLAACANLTELSLLSNPVIRRQHYRFYVISKLPQLKVLDFSKIKPKERQEAERLFRSAAGKLMQEDVLKSKEIETDEAETATHNMA-----QLNEVDRAQVRAAIAAASTPQEIDRIERQLKAGILPT 229          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A0U2IG20_ACAPC (U2 small nuclear ribonucleoprotein A n=1 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2IG20_ACAPC)

HSP 1 Score: 208 bits (530), Expect = 3.420e-61
Identity = 122/245 (49.80%), Postives = 164/245 (66.94%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAP--------AAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 237
            ++ T D+I  A   INP  +RELDLRGYKIP+IENLG T DQFD +D SDNE++KLD FP+  RL +LLL NN + +++E L   LPNL+ L++TNN L  LA+L+ L T  KL M+SLLHN VV K+ YRLY+I+  PSLK LDF+K+ +KERE+A  L +++ G+  ++D+  QA KAKTF PGAP        AA    LT E        IAKA ++EEIE L++ ++ G +P    + GG
Sbjct:    2 VKCTPDLIEGAGQYINPVRDRELDLRGYKIPVIENLGSTLDQFDCIDLSDNEVRKLDGFPQLNRLKTLLLNNNRIVRVAEGLELNLPNLNTLVMTNNSLQELADLEPLTTMKKLEMMSLLHNPVVTKRNYRLYVIHKFPSLKVLDFKKIKMKEREAAKALFKTKEGKTQLKDI--QA-KAKTFVPGAPLPEATNNKAANPAGLTPEQVKNIKTMIAKAKSLEEIERLNQMLRTGKMPGEASENGG 243          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A0K2V8V0_LEPSM (Small nuclear ribonucleoprotein polypeptide A' [Latimeria chalumnae] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2V8V0_LEPSM)

HSP 1 Score: 208 bits (529), Expect = 4.260e-61
Identity = 117/243 (48.15%), Postives = 167/243 (68.72%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRI-------AKATTVEEIEMLSKKIQAGIIPSANYKQG 236
            ++LT D+I  +   INP  +RELDLRGYKIP+IENLG T DQFD +DFSDNEI++LDNFP   RL +L   NN + +I +++  +LPNL+ LILTNN L  LA+L+ L     LT LSL+ N V++K  YRLY+I+ +P+L+ LDF+KV +KERE A    +S+ G+ +++++ ++A  AKTFTPGAP A+E K  ++   +  D+I       A+ATT+EEIE L++ ++ G IP   Y  G
Sbjct:    2 VKLTPDLIEGSAQYINPVRDRELDLRGYKIPVIENLGATLDQFDCIDFSDNEIRQLDNFPFLPRLKTLFFNNNRIIRIGDNINESLPNLNSLILTNNSLQELADLERLAKIKSLTNLSLMSNPVISKPDYRLYLIHKLPNLRMLDFRKVKLKEREEAKAKFKSEEGKKVLKEIKKRA--AKTFTPGAPLADESKKENQPHGLNPDQIRNIKAAIARATTLEEIERLNQMLRTGQIPGT-YSNG 241          
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Match: A0A3Q1EK11_9TELE (Small nuclear ribonucleoprotein polypeptide A' n=6 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A3Q1EK11_9TELE)

HSP 1 Score: 207 bits (527), Expect = 5.300e-61
Identity = 113/239 (47.28%), Postives = 162/239 (67.78%), Query Frame = 0
Query:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLSTLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 236
            ++L+A++I  A    NP  +RELDLRGYKIP++ENLG T DQFD +DFSDNEI+KLD FP  +RL +LL+ NN + +I E+L  +LP+L+ L+LTNN +  L +L  L T   LT+LSLL N V NK++YRLY+IN +P ++ LDFQKV +KER+ A ++ + + G  + +D+A    + KTFTPG  A  E+K T   +A      + IA A+++ E+E L   +QAG IP  + +QG
Sbjct:    2 VKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTVDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQSLPSLTELVLTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVAAQPEKKRTGPSQADVDAIKNAIANASSLAEVERLKGMLQAGQIPGRDLRQG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig913.30444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC4_ECTSI4.250e-19394.04U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A6H5L3Q9_9PHAE9.430e-8876.47SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE59_9STRA5.210e-7158.26Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A7S3XKJ1_HETAK3.800e-6753.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G9L1_9STRA1.270e-6251.25Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A3Q3N132_9LABR3.400e-6248.54Small nuclear ribonucleoprotein polypeptide A' n=2... [more]
A0A7S2F7F7_9STRA1.420e-6150.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0U2IG20_ACAPC3.420e-6149.80U2 small nuclear ribonucleoprotein A n=1 Tax=Acart... [more]
A0A0K2V8V0_LEPSM4.260e-6148.15Small nuclear ribonucleoprotein polypeptide A' [La... [more]
A0A3Q1EK11_9TELE5.300e-6147.28Small nuclear ribonucleoprotein polypeptide A' n=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003603U2A'/phosphoprotein 32 family A, C-terminalSMARTSM00446LRRcap_2coord: 127..145
e-value: 0.0061
score: 25.8
NoneNo IPR availablePFAMPF14580LRR_9coord: 2..174
e-value: 2.2E-63
score: 212.9
NoneNo IPR availablePANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 1..231
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 8..152
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..175
e-value: 1.9E-39
score: 136.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 64..85
score: 5.925
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 42..63
score: 5.255
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 88..109
score: 7.65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig913contigEcto-sp8_S_contig913:10399..15858 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig913.30444.1mRNA_Ecto-sp8_S_contig913.30444.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig913 10399..16118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig913.30444.1 ID=prot_Ecto-sp8_S_contig913.30444.1|Name=mRNA_Ecto-sp8_S_contig913.30444.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=437bp
MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSD
NEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTTLPNLSCLILTNNKLS
TLAELKGLGTCAKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVT
VKERESAARLARSQAGQAMIQDVAEQAEKAKTFTPGAPAAEEQKLTDEHR
AIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGGAPAAANGAAAPA
AAAAPGKPPAATTTEVEKASPQTASPQEPPATAVAAAGKAAAPAAAPTET
GTAATAPEAPAAPAQAAPTETSSMDVDGAEEGKTAEAPVPAADAENGEAE
EEPPATSEAGQGGEGKEEASSAKGGADGGGGGDAMVDDEGGEEAAAETAE
ETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003603U2A'_phosphoprotein32A_C
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt