prot_Ecto-sp8_S_contig11554.1909.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11554.1909.1
Unique Nameprot_Ecto-sp8_S_contig11554.1909.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length306
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11554.1909.1 vs. uniprot
Match: D7FYZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ7_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 2.260e-92
Identity = 215/251 (85.66%), Postives = 219/251 (87.25%), Query Frame = 0 
Query:   56 SEGPDAAIGSWLCVPVLSLPSSRGEDGGDGAVTACCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPXXXXXXXXXXXXXXXXXXXXXRTGTSPTAFPGRPEVTATVEPTPRATMQELRQPDGSSSPSRAAPXXXXXXXXXXXXXAVGPQQEWSRRFGSSRPEPRLLDEDNGDRDNRRSPTGFSGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVKIMSSNSGNEASLAIHRAAEANVEL 306
            SEGPDAAIGSWLCVPVLSLPSSR EDGGDGAVT CCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLP XXXXXXXXXXXXXXXXXXXX+TGTSP AFPG PE TATVEPTPRA M+ELRQPDGSSSPS AAP    XXXXXXXXXAVGPQQEWSRRFGSSRPEPRLLDEDNGDRD+RRSPT F GE XXXXXXXXX               XXXXXXXX SGD KI+SSNSGNEASLAIHRAAEANVEL
Sbjct:  389 SEGPDAAIGSWLCVPVLSLPSSRAEDGGDGAVTVCCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPPXXXXXXXXXXXXXXXXXXXXQTGTSPAAFPGWPEATATVEPTPRAAMRELRQPDGSSSPSLAAPPLPAXXXXXXXXXAVGPQQEWSRRFGSSRPEPRLLDEDNGDRDSRRSPTAFGGEXXXXXXXXXXAFSGEGRRDEAGDKRXXXXXXXX-SGDGKIVSSNSGNEASLAIHRAAEANVEL 638
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BLAST of mRNA_Ecto-sp8_S_contig11554.1909.1 vs. uniprot
Match: A0A6H5K3T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T9_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.180e-86
Identity = 179/254 (70.47%), Postives = 184/254 (72.44%), Query Frame = 0 
Query:   56 SEGPDAAIGSWLCVPVLSLPSSRGEDGGDGAVTACCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPXXXXXXXXXXXXXXXXXXXXXRTGTSPTAFPGRPEVTATVEPTPRATMQELRQPDGSSSPSRAAPXXXXXXXXXXXXXAVGPQQEWSRRFGSSRPEPRLLDEDNGDRDNRRSPTGFSGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SGDVKIMSSNSGNEASLAIHRAAEANVEL 306
            SEGPDAAIGSWLCVPVLSLP SRGEDGGDGAVT CCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLP                     RTGTSP AFPG+P  TATVEPTP A M+ELRQPDGSSSP RAAP             AVGPQQEWSRRFG SRPEPRLLDE NGDRD+RRSPT FSGEQXXXXXXXXXXXX                    X   SGD KIMS+NSGNEASLAI RAA+ANVEL
Sbjct: 2461 SEGPDAAIGSWLCVPVLSLPLSRGEDGGDGAVTVCCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPPPSLPPTAESSDHNHSNDDDERTGTSPAAFPGQPGATATVEPTPGAAMRELRQPDGSSSPLRAAPPAPVQPQPAAASPAVGPQQEWSRRFGPSRPEPRLLDEGNGDRDSRRSPTAFSGEQXXXXXXXXXXXXEDAFSGKGRRDEAGDRRSGSXXXXSGDGKIMSTNSGNEASLAILRAAKANVEL 2714
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11554.1909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYZ7_ECTSI2.260e-9285.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3T9_9PHAE1.180e-8670.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11554contigEcto-sp8_S_contig11554:2724..4880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11554.1909.1mRNA_Ecto-sp8_S_contig11554.1909.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11554 2722..4880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11554.1909.1 ID=prot_Ecto-sp8_S_contig11554.1909.1|Name=mRNA_Ecto-sp8_S_contig11554.1909.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=306bp
GGGGGTTPADLLSSRRSPSRSFRRRSREALLAARASSSSAAASLASMSGE
GGGGGSEGPDAAIGSWLCVPVLSLPSSRGEDGGDGAVTACCAVNKKNGRS
FGDVDEAMLGTIAALYAVAASWLPPPPLPPTAESSDHNNNKDDEERTGTS
PTAFPGRPEVTATVEPTPRATMQELRQPDGSSSPSRAAPSAPAQAQPAAA
APAVGPQQEWSRRFGSSRPEPRLLDEDNGDRDNRRSPTGFSGEQQQQQPP
PESAFSGKGRRDEAGDKRRSSSGGGGGSGDVKIMSSNSGNEASLAIHRAA
EANVEL
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