prot_Ecto-sp8_S_contig11404.1773.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11404.1773.1
Unique Nameprot_Ecto-sp8_S_contig11404.1773.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length218
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11404.1773.1 vs. uniprot
Match: D8LPR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR3_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 8.320e-80
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0 
Query:   76 IDTMIRNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAIAEAPDNCSLRLDMEPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALRRGGTAAATADAPPELASSNGSTRLDSL 217
            +D    NVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAIAEAPDNCSLR D+EPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVAL+RGGTAAATADAPPELASSNGSTR DSL
Sbjct:  314 LDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAIAEAPDNCSLRPDIEPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELASSNGSTRPDSL 455
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BLAST of mRNA_Ecto-sp8_S_contig11404.1773.1 vs. uniprot
Match: A0A6H5KRT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT1_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 4.020e-41
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0 
Query:  134 MEPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALRRGGTAAATADAPPELASSNGSTRLDSL 217
            MEPVVETLVKDV RDLVAVMDVTGSGMLGWTE KKNQTLVTARLATLREFVFSVAL+RGGTAAATADAPPEL  SN STR DSL
Sbjct:    1 MEPVVETLVKDVTRDLVAVMDVTGSGMLGWTELKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELTRSNCSTRPDSL 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11404.1773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPR3_ECTSI8.320e-8093.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRT1_9PHAE4.020e-4191.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 86..169
e-value: 8.6E-9
score: 37.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 97..109
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 84..119
score: 10.552
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 141..176
score: 6.396
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 85..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11404contigEcto-sp8_S_contig11404:5..3944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11404.1773.1mRNA_Ecto-sp8_S_contig11404.1773.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11404 5..3944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11404.1773.1 ID=prot_Ecto-sp8_S_contig11404.1773.1|Name=mRNA_Ecto-sp8_S_contig11404.1773.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=218bp
GGVQRGRRGRRWKRQHGGLEGVAVARWRDGGGRAAGSYCSENGERHRREP
GRCDQSHRMDALHSRAGRGNRQAHAIDTMIRNVGYDGGLLKVFRRYDDDH
SGSITATEMTMMVRDSVSEAIAEAPDNCSLRLDMEPVVETLVKDVARDLV
AVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALRRGGTAAATAD
APPELASSNGSTRLDSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair