prot_Ecto-sp8_S_contig11380.1747.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig11380.1747.1
Unique Name	prot_Ecto-sp8_S_contig11380.1747.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	222

Homology

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BLAST of mRNA_Ecto-sp8_S_contig11380.1747.1 vs. uniprot
Match: D8LU93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU93_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 4.240e-142
Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0

Query:    1 MAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGMALGFFAWNFSAPGGAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGATMPAYLRGEAYGSIKEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGT 222
            MAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGMALGFFAWNF+AP GAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGA MPAYLRGEAYGS+KEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGT
Sbjct:   26 MAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGMALGFFAWNFAAPRGAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEAYGSVKEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGT 247

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BLAST of mRNA_Ecto-sp8_S_contig11380.1747.1 vs. uniprot
Match: A0A6H5JGF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF5_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 7.020e-116
Identity = 209/310 (67.42%), Postives = 214/310 (69.03%), Query Frame = 0

Query:    1 MAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGMALGFFAWNFSAP-GGA----------------------------------------------------------------------------------------GGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGATMPAYLRGEAYGSIKEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEG 221
            MAFGVVLVGCTLVSWILVILCWQL PSTRGPGSRI ADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFS+SALALPNLGQGLATVVAHWLIGMALGFFAWNF+AP GGA                                                                                        GG+AETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGA MPAYLRGEA GS KEGLLCGAVIGAGYLV+RTVSELL GSMVGRALSVLLGL +AASTSEG
Sbjct:   26 MAFGVVLVGCTLVSWILVILCWQLTPSTRGPGSRIPADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSFSALALPNLGQGLATVVAHWLIGMALGFFAWNFAAPRGGADGIVNEFMKFGGKGMIQLMVLLYNWVWKNEYTPSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSITGGLAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEACGSAKEGLLCGAVIGAGYLVVRTVSELLTGSMVGRALSVLLGLSAAASTSEG 335

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig11380.1747.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig11380.1747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LU93_ECTSI	4.240e-142	98.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JGF5_9PHAE	7.020e-116	67.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 37..59
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..36
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 5..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..79
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 145..222
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..105
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 106..124
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..4
None	No IPR available	TMHMM	TMhelix		coord: 2..24
None	No IPR available	TMHMM	TMhelix		coord: 122..144
None	No IPR available	TMHMM	TMhelix		coord: 39..60
None	No IPR available	TMHMM	TMhelix		coord: 85..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig11380	contig	Ecto-sp8_S_contig11380:297..4183 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig11380.1747.1	mRNA_Ecto-sp8_S_contig11380.1747.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig11380 297..4183 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig11380.1747.1 ID=prot_Ecto-sp8_S_contig11380.1747.1|Name=mRNA_Ecto-sp8_S_contig11380.1747.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=222bp
MAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHS
LAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGM
ALGFFAWNFSAPGGAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHH
LRLGLPSGATMPAYLRGEAYGSIKEGLLCGAVIGAGYLVLRTVSELLPGS
MVGRALSVLLGLPSAASTSEGT