prot_Ecto-sp8_S_contig11359.1725.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11359.1725.1
Unique Nameprot_Ecto-sp8_S_contig11359.1725.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length438
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11359.1725.1 vs. uniprot
Match: A0A6H5KJC2_9PHAE (AhpC-TSA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC2_9PHAE)

HSP 1 Score: 652 bits (1681), Expect = 8.540e-230
Identity = 357/417 (85.61%), Postives = 371/417 (88.97%), Query Frame = 0 
Query:    1 MGFQQAETPTFCAMALLASEHKLTMSNSLTSSRTSSPSPRITDDGPPPPDHGWTATQPDYPSRFNEVVISDDGESSILSSQAPSTT--AVAPAAAPSTPRSEAPRRRVLWTAFDSPPPGPGGGRELERRKATFKIFVIFRGSWCTSSQALLKG---FTEINPAIKKAGGKVVALSSQTAEQVGRAAHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVNRNDVVTDSYPHGMAQPCVLAVFTDDAQDEGSVLFRWNQWQTIASMRHADALAHITRALASKADEPEGGPSSGTPTATTRVGLDGFPTPPSSAAAAPPPARLPPRQPTXXXXXXXXXSPSSSFGRTGGYAPFGGDNV--WVPGNGRESRERPTTAAGTRVGGRGALAATASAAADGALAVEWMRTGRHPASMSKPRAAES 410
            M FQQAETPTFCAM L ASEHKLTMSNSL+S RTSSPSPRITD  PPPPDHGW ATQ +YPSR+NE+ ISDDGESSILS QAPSTT  A APAAAPSTPRSEAPRRRVLWTAFDSPPPGPGGGRELERRK TFKI+VIFRG WCTSSQALLKG   F E+NPAIKKAGGKVVALSSQTAEQVGRAAHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVNRN++V D+YPHGMAQPCVLAV TDDAQDEGSVLFRWNQWQTIASMRHAD LAHITRALASKAD PEGGPSSGTPTATT VGLDGF TPPSS       ARLPPRQPTXXXXXXX  SPSSSFGRTG +APF GD V  WVPGN RESRERPTTA+GTR GGRGA+AATA AAAD ALAV WMRTGR+PAS+SK RAA S
Sbjct:    1 MDFQQAETPTFCAMTL-ASEHKLTMSNSLSSGRTSSPSPRITDVSPPPPDHGWKATQRNYPSRYNELAISDDGESSILSIQAPSTTTAAPAPAAAPSTPRSEAPRRRVLWTAFDSPPPGPGGGRELERRKTTFKIYVIFRGGWCTSSQALLKGDFRFMELNPAIKKAGGKVVALSSQTAEQVGRAAHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVNRNEMVKDAYPHGMAQPCVLAVLTDDAQDEGSVLFRWNQWQTIASMRHADTLAHITRALASKADGPEGGPSSGTPTATTHVGLDGFATPPSSXXXXXXXARLPPRQPTXXXXXXXVGSPSSSFGRTGEFAPFRGDKVGLWVPGNRRESRERPTTASGTRGGGRGAMAATAGAAADAALAVGWMRTGRNPASLSKSRAAGS 416
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BLAST of mRNA_Ecto-sp8_S_contig11359.1725.1 vs. uniprot
Match: D8LHS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS8_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 7.160e-137
Identity = 219/265 (82.64%), Postives = 226/265 (85.28%), Query Frame = 0 
Query:  148 LLKGFTEINPAIKKAGGKVVALSSQTAEQVGRAAHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVNRNDVVTDSYPHGMAQPCVLAVFTDDAQDEGSVLFRWNQWQTIASMRHADALAHITRALASKADEPEGGPSSGTPTATTRVGLDGFPTPPSSAAAAPPPARLPPRQPTXXXXXXXXXSPSSSFGRTGGYAPFGGDNV--WVPGNGRESRERPTTAAGTRVGGRGALAATASAAADGALAVEWMRTGRHPASMSKPRAAES 410
            L KGF EINP IKK GGKVVALSSQTAEQVGR AHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVN+NDVV D+YPHGMAQPCVLAV TDDAQDEGSVLFRWNQWQTIASMRH DALAHITRALA K +EPEGGPSSGTPTAT+ VGLDGF TPP         ARLPPRQPT         SPSSSF RTGGYAPFGGD+V  WVPGN RESRERPTTAAGTR GGRGA+AATA AAADGALAVEWM+TGR PAS SKPRAA S
Sbjct:    6 LRKGFMEINPGIKKVGGKVVALSSQTAEQVGRGAHDMRLPFQAFGDPSNGLVDEMNIRFKMGCTVNQNDVVKDTYPHGMAQPCVLAVSTDDAQDEGSVLFRWNQWQTIASMRHVDALAHITRALAIKKNEPEGGPSSGTPTATSHVGLDGFATPPXXXXXXXXXARLPPRQPTLLRQPPRPGSPSSSFERTGGYAPFGGDDVGLWVPGNRRESRERPTTAAGTRGGGRGAIAATARAAADGALAVEWMKTGRDPASTSKPRAAGS 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11359.1725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJC2_9PHAE8.540e-23085.61AhpC-TSA domain-containing protein (Fragment) n=1 ... [more]
D8LHS8_ECTSI7.160e-13782.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 124..250
e-value: 1.1E-7
score: 33.4
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 132..220
e-value: 7.8E-8
score: 32.3
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 133..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11359contigEcto-sp8_S_contig11359:1416..6014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11359.1725.1mRNA_Ecto-sp8_S_contig11359.1725.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11359 1325..6014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11359.1725.1 ID=prot_Ecto-sp8_S_contig11359.1725.1|Name=mRNA_Ecto-sp8_S_contig11359.1725.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=438bp
MGFQQAETPTFCAMALLASEHKLTMSNSLTSSRTSSPSPRITDDGPPPPD
HGWTATQPDYPSRFNEVVISDDGESSILSSQAPSTTAVAPAAAPSTPRSE
APRRRVLWTAFDSPPPGPGGGRELERRKATFKIFVIFRGSWCTSSQALLK
GFTEINPAIKKAGGKVVALSSQTAEQVGRAAHDMRLPFQAFGDPSNGLVD
EMNIRFKMGCTVNRNDVVTDSYPHGMAQPCVLAVFTDDAQDEGSVLFRWN
QWQTIASMRHADALAHITRALASKADEPEGGPSSGTPTATTRVGLDGFPT
PPSSAAAAPPPARLPPRQPTPLRQPPPAGSPSSSFGRTGGYAPFGGDNVW
VPGNGRESRERPTTAAGTRVGGRGALAATASAAADGALAVEWMRTGRHPA
SMSKPRAAESSGGHGGRAAEEEEEEEAPVQETSNGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf