prot_Ecto-sp8_S_contig11283.1647.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11283.1647.1
Unique Nameprot_Ecto-sp8_S_contig11283.1647.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length226
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11283.1647.1 vs. uniprot
Match: D8LPV7_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV7_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 4.830e-135
Identity = 210/225 (93.33%), Postives = 213/225 (94.67%), Query Frame = 0 
Query:    1 MRVRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTGDDEGVPLPGEVFIDSIEPAKDRFGTEFLEFRVVTLRGTRRRXXXXXXXXXXXXXXXXXXXXCYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPGKPKCINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMVFLGLHPITGYPLPWAALSPSAPRQAAPLDDEGRREL 225
            ++VRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTGDDEGVPLPGEVFIDSIEPAKDRFGTEFLEFRVVTLRGTRRR    XXXXXXXXXXXXX   CYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLP K  CINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLM FLGLHPITGYPLPWAAL+PS PRQAAPLDDEGRREL
Sbjct:   76 LKVRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTGDDEGVPLPGEVFIDSIEPAKDRFGTEFLEFRVVTLRGTRRRDSCGXXXXXXXXXXXXXG--CYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPAK--CINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMGFLGLHPITGYPLPWAALAPSTPRQAAPLDDEGRREL 296
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BLAST of mRNA_Ecto-sp8_S_contig11283.1647.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.060e-11
Identity = 41/82 (50.00%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:  112 VWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPGKPKCINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMVFLGL 193
            V RR++ F  LH     M+ G HL DSLPPLP    C +PL+++  AAF+ESRR  LQAYLR LL VP          FLGL
Sbjct:  238 VHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLP----CKSPLLDRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGL 315
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BLAST of mRNA_Ecto-sp8_S_contig11283.1647.1 vs. uniprot
Match: A0A6U1LL59_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LL59_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.320e-9
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0 
Query:  108 YHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPGKPKCINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMVFLGL 193
            +H VV RRFS F  L + + +  W  HL  +LP LP K   I  +++     F+E RR  L+AYL+RL++VP A ++ +L  FLG+
Sbjct:   16 FHYVVTRRFSDFDRLDNHIKSAFWRHHLRSNLPCLPAKK--IKYVIDHSQTDFVEQRRLDLEAYLKRLVQVPHASSNPDLHQFLGI 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11283.1647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPV7_ECTSI4.830e-13593.33PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YSM5_9STRA3.060e-1150.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1LL59_9STRA3.320e-940.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 110..191
e-value: 1.8E-9
score: 37.6
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 53..225
score: 10.988
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 63..195
e-value: 4.8E-14
score: 54.2
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 109..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11283contigEcto-sp8_S_contig11283:553..3939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11283.1647.1mRNA_Ecto-sp8_S_contig11283.1647.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11283 553..4026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11283.1647.1 ID=prot_Ecto-sp8_S_contig11283.1647.1|Name=mRNA_Ecto-sp8_S_contig11283.1647.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=226bp
MRVRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTGDDEGV
PLPGEVFIDSIEPAKDRFGTEFLEFRVVTLRGTRRRDSGGGGGGGGAGKA
VDGGGGCYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPGKPKCIN
PLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMVFLGLHPITGYP
LPWAALSPSAPRQAAPLDDEGRREL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf