prot_Ecto-sp8_S_contig1128.1645.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1128.1645.1
Unique Nameprot_Ecto-sp8_S_contig1128.1645.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length531
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1128.1645.1 vs. uniprot
Match: A0A6H5JSE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE7_9PHAE)

HSP 1 Score: 666 bits (1718), Expect = 5.740e-234
Identity = 387/491 (78.82%), Postives = 398/491 (81.06%), Query Frame = 0 
Query:    1 MRKNDSLTSRERTSSAQADKSSQEKAVLKGTLATLTRGASSRRIRSESPPSLIVRSVNRLGRKSPSGEHQVTPGSVSSGRSEGCRKSSWFSRHSRSPRQQLSSRPTSPVGMVHGQITARSCTTPVPQPSLMDILENTAEEPMSLRSMLRFARENLMEENVLFYLEVVSFKTGGGGRCEYLTTIKRIHELYIQHNSKREINISGHMRLNTMATVEAILRADGCSSGGSTGAPGNVELRVAGDEVERQPAETNVVEAEG--------------------------------------------VDVATAPKLGHADGEEAGASIAEAVMADEGQEGSRAPGSLPLLDPVPTQSPTHKAIVSGNSSSSSSPATESVTPAAVEEERERDAADNAASAGRFTVLGKCRSDSPSSKEISSSSRDGEQDGDT----EEEIRLRRDSTMWDDRCLYSADLAAEDDFNASVEIEQLGLGIGPGGGYGDRTIFDSALLEAS 443
            MRK D LTSR RTSSAQA+KS QEKAVL+GT A LTRG SS RIRSESPPSLIVR+ + LGRKS  GEHQV  GS SSGRSEG RK  WFSRHSRSP QQLSS PTSPVGM+HGQIT RSCTTPVPQPSLM+ILENTAEEPMSLRSMLRFARENLMEENVLFYLEVVSFKTGGGGRCEYLT IKRIHELYIQHNSKREINISG MRLNTMATVEAILRADG SSGGS  +PGNVELR AGDEVERQPAETNVVEA G                                            VDVAT PK GHADGEEAG S+AEAV+ADEGQEGSRAPGSLPLLD VPTQ PTHKAIVSGNSSSS SPATESVTPAAVEEE ERDAADNAASAGRFTVLGKCRSDSPSSKEISSSS             EEEIRLRRDSTMWDDRCL+SADLAAEDDFNASVEIE LGLGIGPGGGYGDRTIFDSALLEA+
Sbjct:  111 MRKKDGLTSRARTSSAQAEKS-QEKAVLQGTFARLTRGTSSGRIRSESPPSLIVRNAHPLGRKSSWGEHQVALGSASSGRSEGYRKKPWFSRHSRSPSQQLSSNPTSPVGMIHGQITPRSCTTPVPQPSLMEILENTAEEPMSLRSMLRFARENLMEENVLFYLEVVSFKTGGGGRCEYLTNIKRIHELYIQHNSKREINISGQMRLNTMATVEAILRADGQSSGGSADSPGNVELRAAGDEVERQPAETNVVEAGGGGCFEAATPAAETPAATGSEXXXXXXXXXXXXXXXXAKSVGVEDVDVATVPKFGHADGEEAGVSVAEAVIADEGQEGSRAPGSLPLLDSVPTQLPTHKAIVSGNSSSSGSPATESVTPAAVEEETERDAADNAASAGRFTVLGKCRSDSPSSKEISSSSXXXXXXXXXXXXXEEEIRLRRDSTMWDDRCLHSADLAAEDDFNASVEIELLGLGIGPGGGYGDRTIFDSALLEAN 600
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1128.1645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSE7_9PHAE5.740e-23478.82RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPFAMPF00615RGScoord: 135..215
e-value: 1.0E-6
score: 29.0
NoneNo IPR availableGENE3D1.20.58.1850coord: 124..228
e-value: 2.1E-9
score: 39.1
NoneNo IPR availablePANTHERPTHR10845REGULATOR OF G PROTEIN SIGNALINGcoord: 19..216
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 127..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1128contigEcto-sp8_S_contig1128:13115..15844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1128.1645.1mRNA_Ecto-sp8_S_contig1128.1645.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1128 13091..15844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1128.1645.1 ID=prot_Ecto-sp8_S_contig1128.1645.1|Name=mRNA_Ecto-sp8_S_contig1128.1645.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=531bp
MRKNDSLTSRERTSSAQADKSSQEKAVLKGTLATLTRGASSRRIRSESPP
SLIVRSVNRLGRKSPSGEHQVTPGSVSSGRSEGCRKSSWFSRHSRSPRQQ
LSSRPTSPVGMVHGQITARSCTTPVPQPSLMDILENTAEEPMSLRSMLRF
ARENLMEENVLFYLEVVSFKTGGGGRCEYLTTIKRIHELYIQHNSKREIN
ISGHMRLNTMATVEAILRADGCSSGGSTGAPGNVELRVAGDEVERQPAET
NVVEAEGVDVATAPKLGHADGEEAGASIAEAVMADEGQEGSRAPGSLPLL
DPVPTQSPTHKAIVSGNSSSSSSPATESVTPAAVEEERERDAADNAASAG
RFTVLGKCRSDSPSSKEISSSSRDGEQDGDTEEEIRLRRDSTMWDDRCLY
SADLAAEDDFNASVEIEQLGLGIGPGGGYGDRTIFDSALLEASAHLQAGL
IFVILRHQVYPKFVARVANSSSCHSSTSSTTVHTATLSTTSISTTTLGTP
VKPIKANRVSLSQSEEVAKAVRAELAKCYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf