prot_Ecto-sp8_S_contig1127.1632.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig1127.1632.1
Unique Name	prot_Ecto-sp8_S_contig1127.1632.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	911

Homology

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BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot
Match: D7FKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD5_ECTSI)

HSP 1 Score: 1592 bits (4121), Expect = 0.000e+0
Identity = 840/911 (92.21%), Postives = 855/911 (93.85%), Query Frame = 0

Query:    1 MKSEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEGGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEESAPSNAVTAEENNTNVAEQEGKDFDTRYSDRSHNEAESEGNREAQEDDENSKGISAAHGELPPGEETHDSPHRPQRFSEVDGSEDGYGRAGDEPAGTSQHGSGEKDLGSSSGEPQRNHDSWTGRELRGTPSNRNEPTTELVQASSLCVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAALEEQLRQQEARGEAWHLTVFSAETPLHPADPSLRGRPERQGRSDPEQATGSGGEGSPRATTARGGAAAPPFPAHAELRKVAEDLSTLRMKQARDTHPDFSPTFPALSLVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNNIVSNHMARAADILARDKGSRFPGNGFFITATLGGGTYVDPRLRFEGHSGLRGEEPRGGFTERQRARGLAFPTENRYSDPALCRSLTPAGSARLLLELLKGLRLSVVAGGERGQVERENFEVFLSTHKDKALRSARPRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAEAEILALMVADDEEETVVEGGVGVARQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSESLTELERLGVGEASGSVPVLNALTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRAWEILESRHGRNDPDVGAACVSLGNLAVIRRRLNEAIDWFRRALRTFEVLEEATGLMEKAATFYSERVTTAAERDRSAFVRPATVSI 911
            MK+EGGGQVRKGTRVDCLFGDEYFRGKVDDTDG GSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGE GYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSW HEESAPS AVTAE+NNTNVAEQEG  FDTRYSDRSHNEAESEGNREAQ+DDENSK ISAAHGELPP EETHDSP +PQRFSEVDGSEDGYGRAGDEPAGTSQHGS  + LGSSSGEPQR HDSWTGRELRGT SNRNEPTTELVQASSL VPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIA LEEQLRQQEARGEAWHL VFSAETPLHPADPSLRGR ERQGRSDPEQATGSGGEGSPRATTARGGAAAP FPAHAELR+VAEDLSTLRMKQ              ++LVRLCYGDASLEMVQAIADLADGYAKEDLWPQ     VSNHMARAADILARDKGSR PGNGFFITAT GGGTYVDPRLRF+GHSGLRG+EPRGG+ E QRARGLAFPTENRYSDPALCRSLT A SARLLLELLKGLRLSVV GGERGQVERENFE FLSTHKDKALRSAR RLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAE+EILALMVADDEEET VEG VGVA QRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSE+L ELERLG+GEASGSVPVLNALTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVR WEILESRHGRNDPDVGAACVSLG+LAVIRRRLNEAIDWFRRAL TFE LEEATGLMEKAATFYSERVTTAAE DRSAFVR ATVSI
Sbjct:    1 MKAEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGSGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEDGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSWSHEESAPSKAVTAEDNNTNVAEQEGTGFDTRYSDRSHNEAESEGNREAQKDDENSKVISAAHGELPPVEETHDSPRQPQRFSEVDGSEDGYGRAGDEPAGTSQHGSSPRHLGSSSGEPQRIHDSWTGRELRGTLSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRLERQGRSDPEQATGSGGEGSPRATTARGGAAAPSFPAHAELRQVAEDLSTLRMKQ--------------IALVRLCYGDASLEMVQAIADLADGYAKEDLWPQ-----VSNHMARAADILARDKGSRVPGNGFFITATPGGGTYVDPRLRFKGHSGLRGDEPRGGYPEGQRARGLAFPTENRYSDPALCRSLTQARSARLLLELLKGLRLSVVEGGERGQVERENFEAFLSTHKDKALRSARHRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAESEILALMVADDEEETAVEGRVGVAWQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSEALAELERLGLGEASGSVPVLNALTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRVWEILESRHGRNDPDVGAACVSLGSLAVIRRRLNEAIDWFRRALGTFEALEEATGLMEKAATFYSERVTTAAEEDRSAFVRQATVSI 892

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BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot
Match: A0A6H5JCV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV6_9PHAE)

HSP 1 Score: 966 bits (2498), Expect = 0.000e+0
Identity = 545/774 (70.41%), Postives = 567/774 (73.26%), Query Frame = 0

Query:    1 MKSEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEGGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEESAPSNAVTAEENNTNVAEQEGKDFDTRYSDRSHNEAESEGNREAQEDDENSKGISAAHGELPPGEETHDSPHRPQRFSEVDGSEDGYGRAGDEPAGTSQHG-----------------------------------------------------SGEKDLGSSSGEPQRNHDSWTGRELRGTPSNRNEPTTELVQASSLCVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAALEEQLRQQ------------EARGEAWHLTVFSAETPLHPADPSLRGRPERQGRSDPEQ----ATGSGGEGSPRATTARGGAAAPPFPAHAELRKVAEDLSTLRMKQARDTHPDFSPT----------------------FPALSLVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNNIV------------------------------------------------------------SNHMARAADILARDKGSRFPGNGFFITATLGGGTYVDPRLRFEGHSGLRGEEPRGGFTERQRARGLAFPTENR----YSDPALCRSLTPAGSARLLLELLKGLRLSVVAGGERGQVERENFEVFLSTHKDKALRSARPRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKI 619
            MK+EGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLE+PLEQGCRVECMFEGE GYFDGVIS DNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEES P+NAVTAE+N TNV EQEGK  DT YS+RSHNEAESEGNREAQ++D+NSKGISAAHGELPP EETHD PHRPQRFSEV GSEDGYGR GDEPAGTSQH                                                      SGE+D GSSSGEPQRNHDS TGR L GTPSNR+EPT ELVQA SL VPTSPNPLHAHLEALAAAAP LLAEAPPDFRLSA SHRIAALEEQLRQQ            EARGEAWHL VFSA+TPLHPADPSL GRPERQGRS PEQ    ATGSGGEGS RAT ARGGAAAP FPAH ELR+V EDLSTLRMKQAR      +P                          ++LVRLCYGDASLEMVQAIADLADGYAKEDLWPQASN++V                                                            SNHMARAADILARDKGSRFPG GFFI AT GGGTYVDPRLRFE HSGLRG+EPRGG TE QRARGLAFPTENR    YSDPALCRS+TPA +ARLLLELLKGLRLSVV GGERGQVERE FEVFLSTH+DKALRSARPRLLLEAQMP NCGWGAALGCLRRNSP F DLNLK+
Sbjct:    1 MKAEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLEIPLEQGCRVECMFEGEDGYFDGVISTDNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEESVPTNAVTAEDNYTNVTEQEGKALDTGYSNRSHNEAESEGNREAQKNDDNSKGISAAHGELPPREETHDPPHRPQRFSEVGGSEDGYGRTGDEPAGTSQHXXXXXXXXXXXXXXXXXXXXSVNYGDNGIAQETRDCDFGHDICSRVKETRSSTRSGEEDPGSSSGEPQRNHDSCTGRNLWGTPSNRDEPTAELVQAPSLYVPTSPNPLHAHLEALAAAAPHLLAEAPPDFRLSATSHRIAALEEQLRQQVGGVLWPCGKGGEARGEAWHLPVFSAKTPLHPADPSLCGRPERQGRSIPEQVSAEATGSGGEGSSRATKARGGAAAPSFPAHTELRQVVEDLSTLRMKQARSAQ--LAPVKLMAARETVAAAIMMSRSVFSYIAQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSVVVGLSTLHRERSRSTRVHPSWVVRRAKRQGEDSVMPLFQVGDEEPTEVLAAVPSVDELLQVSNHMARAADILARDKGSRFPGTGFFIAATPGGGTYVDPRLRFEEHSGLRGDEPRGGCTEGQRARGLAFPTENRCCARYSDPALCRSITPARAARLLLELLKGLRLSVVEGGERGQVEREKFEVFLSTHEDKALRSARPRLLLEAQMPGNCGWGAALGCLRRNSPFFNDLNLKV 772

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BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot
Match: A0A6H5J7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A2_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.390e-46
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0

Query:  786 AEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRAWEILESRHGRNDPDVGAACVSLGNLAVIRRRLNEAIDWFRRALRTFEV 873
            ++IEERTWQALVAYRSK+LTRELGGKGKELDTAEDYLVRAWEILESR GRNDPDVGAAC+SLGNLAVIRRRLNEAIDWFRRAL TFEV
Sbjct:   19 SQIEERTWQALVAYRSKVLTRELGGKGKELDTAEDYLVRAWEILESRQGRNDPDVGAACISLGNLAVIRRRLNEAIDWFRRALETFEV 106

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BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot
Match: A0A835Z0D6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.040e-24
Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0

Query:   14 RVDCLFGD-EYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEGGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIR 109
            RVDCLF D EY+RG V   +  G+ YR++FDDGDIR DAP  DL  PL  G RV C F  E  YF GVI  DNGD TY + +DDGD L++A R DIR
Sbjct:   10 RVDCLFDDGEYYRGSVAAANADGT-YRIVFDDGDIRHDAPLSDLLSPLLPGTRVSCYFPSEADYFPGVIGADNGDGTYHIRYDDGDELESASRRDIR 105

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig1127.1632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FKD5_ECTSI	0.000e+0	92.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JCV6_9PHAE	0.000e+0	70.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J7A2_9PHAE	2.390e-46	93.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z0D6_9STRA	3.040e-24	57.73	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 296..316
None	No IPR available	GENE3D	2.30.30.140		coord: 60..110 e-value: 5.6E-9 score: 37.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 804..905 e-value: 2.1E-9 score: 38.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 814..876

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig1127	contig	Ecto-sp8_S_contig1127:1510..12196 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig1127.1632.1	mRNA_Ecto-sp8_S_contig1127.1632.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig1127 1510..12196 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig1127.1632.1 ID=prot_Ecto-sp8_S_contig1127.1632.1|Name=mRNA_Ecto-sp8_S_contig1127.1632.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=911bp
MKSEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIRED
APPEDLELPLEQGCRVECMFEGEGGYFDGVISIDNGDATYKVDFDDGDVL
DAAPRHDIRVLSWPHEESAPSNAVTAEENNTNVAEQEGKDFDTRYSDRSH
NEAESEGNREAQEDDENSKGISAAHGELPPGEETHDSPHRPQRFSEVDGS
EDGYGRAGDEPAGTSQHGSGEKDLGSSSGEPQRNHDSWTGRELRGTPSNR
NEPTTELVQASSLCVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAIS
HRIAALEEQLRQQEARGEAWHLTVFSAETPLHPADPSLRGRPERQGRSDP
EQATGSGGEGSPRATTARGGAAAPPFPAHAELRKVAEDLSTLRMKQARDT
HPDFSPTFPALSLVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNNIV
SNHMARAADILARDKGSRFPGNGFFITATLGGGTYVDPRLRFEGHSGLRG
EEPRGGFTERQRARGLAFPTENRYSDPALCRSLTPAGSARLLLELLKGLR
LSVVAGGERGQVERENFEVFLSTHKDKALRSARPRLLLEAQMPSNCGWGA
ALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAEAEI
LALMVADDEEETVVEGGVGVARQRLRSLLHVRVQTLTGRCETHTNRLAAA
SRNLSESLTELERLGVGEASGSVPVLNALTDALALTHRRHQEMSSIKAKK
LAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYR
SKILTRELGGKGKELDTAEDYLVRAWEILESRHGRNDPDVGAACVSLGNL
AVIRRRLNEAIDWFRRALRTFEVLEEATGLMEKAATFYSERVTTAAERDR
SAFVRPATVSI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf