prot_Ecto-sp8_S_contig11209.1568.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11209.1568.1
Unique Nameprot_Ecto-sp8_S_contig11209.1568.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length278
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11209.1568.1 vs. uniprot
Match: D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.940e-63
Identity = 251/286 (87.76%), Postives = 252/286 (88.11%), Query Frame = 0 
Query:    1 RSTGGEAYGRDDEDFVAELDFVCQERGPQHQQSHDGGDSDGDAVTSRQQARSISASGGGSGLGYGSSGDEGRSSESXXXXXXXXXXXXXXXXXXXXXXXMGLGLGMNVEPHSLLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GSPCARCGTPSPNEAEEGMMFDMGAMDMDLGLAPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGSNHVVGPLGGGGMGLRASRGSGFPWPPANRE 278
            RS GGEAYGRDDEDFVAELDFVCQERG Q QQSHDGGDSDGDAVT RQQARSISASG      YGSSGDEGRSSE XXXXXXXXXXXXXXXXXXXXXXXMGLGLGMNVEPHSLLTA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        GSPCARCGTPSPNEAEEGMMFDMGAMDMDL        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGSNHV+GPLGGGGMGLRASRGSGFPWPPANRE
Sbjct:  387 RSAGGEAYGRDDEDFVAELDFVCQERGQQQQQSHDGGDSDGDAVTCRQQARSISASG------YGSSGDEGRSSEXXXXXXXXXXXXXXXXXXXXXXXXMGLGLGMNVEPHSLLTAVSATATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPCARCGTPSPNEAEEGMMFDMGAMDMDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGSNHVLGPLGGGGMGLRASRGSGFPWPPANRE 666
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BLAST of mRNA_Ecto-sp8_S_contig11209.1568.1 vs. uniprot
Match: A0A6H5KVH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH6_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 9.350e-27
Identity = 80/104 (76.92%), Postives = 82/104 (78.85%), Query Frame = 0 
Query:  175 GSPCARCGTPSPNEAEEGMMFDMGAMDMDLGLAPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGSNHVVGPLGGGGMGLRASRGSGFPWPPANRE 278
            G+PCARCGTP  N+AEEGMMFDMGAMDMDLGLAP      XXXXXXXXXXXXXXXXX          X  ANGSNHVVGPLGGGGMGL ASRGSGFPWPPA RE
Sbjct:   30 GTPCARCGTPPSNDAEEGMMFDMGAMDMDLGLAP------XXXXXXXXXXXXXXXXXPAPVFIGSGSXGGANGSNHVVGPLGGGGMGLTASRGSGFPWPPAIRE 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11209.1568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD5_ECTSI1.940e-6387.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVH6_9PHAE9.350e-2776.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11209contigEcto-sp8_S_contig11209:3..5248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11209.1568.1mRNA_Ecto-sp8_S_contig11209.1568.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11209 3..5248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11209.1568.1 ID=prot_Ecto-sp8_S_contig11209.1568.1|Name=mRNA_Ecto-sp8_S_contig11209.1568.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=278bp
RSTGGEAYGRDDEDFVAELDFVCQERGPQHQQSHDGGDSDGDAVTSRQQA
RSISASGGGSGLGYGSSGDEGRSSESGHGSTSDEGIMSEVGMALTSQEAM
GLGLGMNVEPHSLLTAAAAAQEESAKDVPPVARPLFGGGGGGGKYIPPAM
RAAARAEAAAAAAAAAATAGGEGGGSPCARCGTPSPNEAEEGMMFDMGAM
DMDLGLAPPPRSATPPTPAPPPPPPQQPSASPASAFIGSGGGGGANGSNH
VVGPLGGGGMGLRASRGSGFPWPPANRE
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