prot_Ecto-sp8_S_contig11127.1498.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11127.1498.1
Unique Nameprot_Ecto-sp8_S_contig11127.1498.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length360
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11127.1498.1 vs. uniprot
Match: D7FS10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS10_ECTSI)

HSP 1 Score: 627 bits (1616), Expect = 8.530e-223
Identity = 343/359 (95.54%), Postives = 347/359 (96.66%), Query Frame = 0 
Query:    1 ASIFDRIADVVFNEEQKEQDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQGPAFRAGVQTDDLVIGVGEHTVSSYGTVLAFMNIMGRPIELHFRKSDKGSGDXXXXXXXXPISASHAGSRGXXXXGSAAKPEGFRATKAGGVSKSGPIRGNVEGTRGDSLSRKLKGAAGAKSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFCDLQKQYGR 359
            ASIFDRIADVVFNEEQK+QDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQG AFRAG+QTDDLVIGVGE+TVSSYGTVLAFMNIMGRPIELHFRKSDKGSGD XXXXXXX ISA H     XXXX SAAKPEGFRATKAGGVSKSGPIRGN+EGTRGDSLSRKLKGAAG KSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGF DLQKQYGR
Sbjct:  165 ASIFDRIADVVFNEEQKKQDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQGQAFRAGIQTDDLVIGVGENTVSSYGTVLAFMNIMGRPIELHFRKSDKGSGDGXXXXXXXXISAXHXXXXXXXXXXSAAKPEGFRATKAGGVSKSGPIRGNLEGTRGDSLSRKLKGAAGVKSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLQKQYGR 523
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BLAST of mRNA_Ecto-sp8_S_contig11127.1498.1 vs. uniprot
Match: A0A835YTV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.460e-9
Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 0 
Query:   18 EQDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDP-DTRDAIVGKIVEQGPAFRAGVQTDDLVIGVGEHTVSS-----------------YGTVLAFMNIMGRPIELHFRKSDKGS 115
            E + VD  A+R  L  EF V F EG++GM+L     DT +  V K+VE+G A   GV+  D+V  VG+   +S                 YGT LAF+NI+GRP+ L F+K + G+
Sbjct: 1207 EDEIVDWSALRRALPKEFSVEFNEGSIGMSLVRTAADTAE--VSKVVERGQAHTGGVKAGDVVSAVGDSVATSMNXXXXXXXXXXXXXXXYGTTLAFLNILGRPVTLWFQKGEDGT 1320
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BLAST of mRNA_Ecto-sp8_S_contig11127.1498.1 vs. uniprot
Match: A0A6U1C867_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C867_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.080e-6
Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 0 
Query:  220 AGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSR---SSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSF-------ALQFKERSLEMTCDSHAEMRQLVAGF 350
            A F EK+E+GV V K+ ++G AA RLL L     S+ W  +   +    R     S+      K ++  L  L EV  G+ PDP  P + G+  LR H  +    R         +L F +R++++  +S A+ + L  GF
Sbjct:  167 AEFKEKLENGVQVVKFNRRGQAAFRLLVLKEDGRSLTW-SVPRGTQADGRLGFGQSVRRKFSAKSDSFDLRSLSEVRLGEAPDPAFPGKFGTETLRMHASKYAQIRQMQEHGLCVSLIFPDRTVDLGSNSQAQRQFLTRGF 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11127.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS10_ECTSI8.530e-22395.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTV8_9STRA3.460e-938.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1C867_9STRA4.080e-630.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 23..115
e-value: 7.1E-6
score: 27.9
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 41..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11127contigEcto-sp8_S_contig11127:2586..6582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11127.1498.1mRNA_Ecto-sp8_S_contig11127.1498.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11127 2586..6582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11127.1498.1 ID=prot_Ecto-sp8_S_contig11127.1498.1|Name=mRNA_Ecto-sp8_S_contig11127.1498.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=360bp
ASIFDRIADVVFNEEQKEQDPVDAIAVRSELEDEFRVSFREGAMGMTLSM
DPDTRDAIVGKIVEQGPAFRAGVQTDDLVIGVGEHTVSSYGTVLAFMNIM
GRPIELHFRKSDKGSGDGGGGSGGGPISASHAGSRGGDGGGSAAKPEGFR
ATKAGGVSKSGPIRGNVEGTRGDSLSRKLKGAAGAKSAGGIAPRSPISPR
SQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDG
VSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDP
TRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGF
CDLQKQYGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf