prot_Ecto-sp8_S_contig11116.1483.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11116.1483.1
Unique Nameprot_Ecto-sp8_S_contig11116.1483.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length491
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11116.1483.1 vs. uniprot
Match: D7FPC8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC8_ECTSI)

HSP 1 Score: 834 bits (2154), Expect = 2.000e-300
Identity = 469/491 (95.52%), Postives = 473/491 (96.33%), Query Frame = 0 
Query:    1 QTKNWQGDRGGGVNTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAANEVNNTGFLAGKKGLVGGLLLEAFRASPPRRAVSLGRDPVFLGQSFVNYVSFCGAVEPKHGGRDLDDQRRVLDKAWKTKPKSPRSSQPSPTQVLPKHPASGRSWDSGAGGGGKRGKGPISECPDTEVLPARAPMACEFNKSRTSGGPGQLDHWERIELKRILDGQGGSTPPAKHFLTRKQAFSGIKKMVTQGRRPRIYGIEPQLSSDDDSLNSLSGIGEGGSGSVVAAIPDGSSRTNLDVLFDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPQADVRVLLRTLEEGVSAPGGVGPLEWDWLSGEEARDRARKMYREASHAQRRMQLMADEEDEAVRQEADQIRSKIAVLTRNAARLEALASASASSDTTGALTPLLFMHSIPTQGH 491
            +TKNWQGDRGGG NTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAA+E +NTGFLAGKKGLVGGLLLEAFRASPPRRAVSLGRDPVFLGQSFVNYVSFCGAVEPKHGGRDLDDQRRVLDKAWK KPKSPRSSQPSPTQVLPKHPASGRSWDSGA        GPISECPDTEVLPARAPMACEFNKSR SGGPGQLDHWERIELKRILDGQGGSTPPAK FLTRKQAFSGIKKMV QGRRPRIYGIEPQLSSDDDSLNSLSGIGEGGSG VVAAIPDGSSRTNLDVLFDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPQADVRVLLRTLEEGVSAPGGVGPLEWDWLSGEEARDRARKMYREASHAQRRMQLMADEEDEAVRQEADQIRSKIAVLTRNAARLEALASAS SSDTTGA TP+LFMHS PTQGH
Sbjct:  152 ETKNWQGDRGGGANTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAADEADNTGFLAGKKGLVGGLLLEAFRASPPRRAVSLGRDPVFLGQSFVNYVSFCGAVEPKHGGRDLDDQRRVLDKAWKAKPKSPRSSQPSPTQVLPKHPASGRSWDSGAXXXXXXXXGPISECPDTEVLPARAPMACEFNKSRNSGGPGQLDHWERIELKRILDGQGGSTPPAKLFLTRKQAFSGIKKMVIQGRRPRIYGIEPQLSSDDDSLNSLSGIGEGGSGKVVAAIPDGSSRTNLDVLFDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPQADVRVLLRTLEEGVSAPGGVGPLEWDWLSGEEARDRARKMYREASHAQRRMQLMADEEDEAVRQEADQIRSKIAVLTRNAARLEALASASPSSDTTGAPTPMLFMHSTPTQGH 642
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11116.1483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPC8_ECTSI2.000e-30095.52Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 444..464

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11116contigEcto-sp8_S_contig11116:2190..5972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11116.1483.1mRNA_Ecto-sp8_S_contig11116.1483.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11116 2190..5972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11116.1483.1 ID=prot_Ecto-sp8_S_contig11116.1483.1|Name=mRNA_Ecto-sp8_S_contig11116.1483.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=491bp
QTKNWQGDRGGGVNTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRR
ILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAANEVNNTGFL
AGKKGLVGGLLLEAFRASPPRRAVSLGRDPVFLGQSFVNYVSFCGAVEPK
HGGRDLDDQRRVLDKAWKTKPKSPRSSQPSPTQVLPKHPASGRSWDSGAG
GGGKRGKGPISECPDTEVLPARAPMACEFNKSRTSGGPGQLDHWERIELK
RILDGQGGSTPPAKHFLTRKQAFSGIKKMVTQGRRPRIYGIEPQLSSDDD
SLNSLSGIGEGGSGSVVAAIPDGSSRTNLDVLFDAAAALSSSASSSGGGA
AAAVGRNGATNKGGGGGGGGQEEGGDPQADVRVLLRTLEEGVSAPGGVGP
LEWDWLSGEEARDRARKMYREASHAQRRMQLMADEEDEAVRQEADQIRSK
IAVLTRNAARLEALASASASSDTTGALTPLLFMHSIPTQGH
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