prot_Ecto-sp8_S_contig11067.1440.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11067.1440.1
Unique Nameprot_Ecto-sp8_S_contig11067.1440.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11067.1440.1 vs. uniprot
Match: D8LFQ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ3_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 2.610e-5
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:   31 KKEGQVKIS---KGKSDFFRSRDVHGTGSSKWIIGKRQFDSNGRDKTLSYPVDDKGKMVTG 88
            K++G V+ S   + +S +F  +DV G    K I G +QFD+NG+++ LSYP D  GK ++G
Sbjct: 1049 KEDGTVRTSARRRSESKWFAYKDVRGINGGKDIFGLKQFDTNGKERNLSYPSDASGKDLSG 1109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11067.1440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFQ3_ECTSI2.610e-540.98Ubiquitin carboxyl-terminal hydrolase family prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11067contigEcto-sp8_S_contig11067:507..770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11067.1440.1mRNA_Ecto-sp8_S_contig11067.1440.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11067 507..771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11067.1440.1 ID=prot_Ecto-sp8_S_contig11067.1440.1|Name=mRNA_Ecto-sp8_S_contig11067.1440.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=88bp
QWSSLAEPINDKSVMVSIGSFGRAYKITVGKKEGQVKISKGKSDFFRSRD
VHGTGSSKWIIGKRQFDSNGRDKTLSYPVDDKGKMVTG
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