prot_Ecto-sp8_S_contig11041.1416.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11041.1416.1
Unique Nameprot_Ecto-sp8_S_contig11041.1416.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length330
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11041.1416.1 vs. uniprot
Match: D7FJB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB8_ECTSI)

HSP 1 Score: 577 bits (1488), Expect = 7.990e-200
Identity = 306/331 (92.45%), Postives = 315/331 (95.17%), Query Frame = 0 
Query:    1 MTPQVLGALKLPFVAALALALVLPASAIDGSVGGTSCHREATACDANAECSTCRGGLERGMIATECQGYSGLLDPRPSFCKVLEASYCCNVGESGQTQACLAEDLMMEYLECLLGGRECSAIEDMPCYGEESRASVPRELSAAGEDEVSSVDAGYVEDSGSSPSPWYPLTTTPGPTSQLQPFTSATGPPTSMAVGLEGGLGTGVVKGTLSAMGVPMSLIDEVGEEVAVQEETLSPAARVLGVDVENLSFDNLRYFQGAESEVSITVNPEFLVDEGDIGGGTTTGEI--RGLAKTDLMAKSTGLGEKKSPLRTSGNRLSQTYAQDLVQLYAE 329
            MTPQV GALKLPFVAALALALVLPASAIDGSV GTSCHREATACDANAECSTCRGGLERGM+ATECQGYSGLLDPR SFCKVLEASYCCNVGESGQTQACLAEDL+MEYLECLLGGRECS IEDMPCYGEESRASVPRELSAAGEDEVSSVDAGYVEDSGSSPSP YPLTTTPGPTSQL+ FTSATG PTSMAVGLEGGLGTGVVKGTLSAMGVPMSLIDEVGE+VAVQEETLSPAA VLGVDVENLSFDNLRYFQGAESEVSITVNPEFLVD+ +IGGGTTTG +   G A+T LMAKSTGLGEKKSPL TSGNRLSQ+YAQDLVQLYAE
Sbjct:    1 MTPQVPGALKLPFVAALALALVLPASAIDGSVVGTSCHREATACDANAECSTCRGGLERGMLATECQGYSGLLDPRRSFCKVLEASYCCNVGESGQTQACLAEDLIMEYLECLLGGRECSTIEDMPCYGEESRASVPRELSAAGEDEVSSVDAGYVEDSGSSPSPSYPLTTTPGPTSQLKFFTSATGSPTSMAVGLEGGLGTGVVKGTLSAMGVPMSLIDEVGEKVAVQEETLSPAASVLGVDVENLSFDNLRYFQGAESEVSITVNPEFLVDQDEIGGGTTTGVVGATGDAETHLMAKSTGLGEKKSPLHTSGNRLSQSYAQDLVQLYAE 331
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11041.1416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJB8_ECTSI7.990e-20092.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..329
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.887

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11041contigEcto-sp8_S_contig11041:479..4694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11041.1416.1mRNA_Ecto-sp8_S_contig11041.1416.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11041 479..4694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11041.1416.1 ID=prot_Ecto-sp8_S_contig11041.1416.1|Name=mRNA_Ecto-sp8_S_contig11041.1416.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=330bp
MTPQVLGALKLPFVAALALALVLPASAIDGSVGGTSCHREATACDANAEC
STCRGGLERGMIATECQGYSGLLDPRPSFCKVLEASYCCNVGESGQTQAC
LAEDLMMEYLECLLGGRECSAIEDMPCYGEESRASVPRELSAAGEDEVSS
VDAGYVEDSGSSPSPWYPLTTTPGPTSQLQPFTSATGPPTSMAVGLEGGL
GTGVVKGTLSAMGVPMSLIDEVGEEVAVQEETLSPAARVLGVDVENLSFD
NLRYFQGAESEVSITVNPEFLVDEGDIGGGTTTGEIRGLAKTDLMAKSTG
LGEKKSPLRTSGNRLSQTYAQDLVQLYAE*
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