prot_Ecto-sp8_S_contig11017.1390.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11017.1390.1
Unique Nameprot_Ecto-sp8_S_contig11017.1390.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: D7FPU1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU1_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 3.720e-77
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS
Sbjct:   48 MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 219          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A6H5L0B7_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B7_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 2.000e-75
Identity = 163/172 (94.77%), Postives = 163/172 (94.77%), Query Frame = 0
Query:    1 MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXX         ERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS
Sbjct:  175 MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXGMRQVQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 346          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A835ZJ40_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ40_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.720e-25
Identity = 71/160 (44.38%), Postives = 93/160 (58.13%), Query Frame = 0
Query:   16 AARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER---VQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            AARLS    +  +D+NRV+ +A DL  +A RR  ++D +R                                 ++    QM EEAIN AII+ETE EL  INKSL+ V+EI++DLA++V QQQE VE IE  TE AH RAQ+GL QVQ+A+ YQPSC +S
Sbjct:   20 AARLSVCCVR-EQDYNRVSRLAKDLEVEAARRAEDLDRRRRGTAAAEAAVAARIFGVEDNADSAGGGALRGPQQQQLQAQMAEEAINQAIIEETEAELGAINKSLHAVHEIFKDLASMVSQQQEQVEHIEEQTEAAHQRAQQGLAQVQQASHYQPSCSIS 178          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: F0Y8W0_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W0_AURAN)

HSP 1 Score: 87.8 bits (216), Expect = 1.150e-17
Identity = 48/83 (57.83%), Postives = 67/83 (80.72%), Query Frame = 0
Query:   90 RVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            +V MQEEAIN AI++E EEE+++IN++++KVNEI+RDLA +V++QQ  V++I    E +HA A++GL QVQKA   QPSCVVS
Sbjct:  217 QVAMQEEAINDAILREREEEIREINQNVHKVNEIFRDLATLVDKQQGEVDQIGELVEKSHAHAEKGLDQVQKAAKLQPSCVVS 299          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A7S3JXJ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXJ1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.700e-16
Identity = 46/83 (55.42%), Postives = 66/83 (79.52%), Query Frame = 0
Query:   90 RVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            +V MQEEAIN AI++E EEE+++IN+S++KVNEI+RDLA IV++QQ  V++I    E +H  A++GL QVQKA   QP+C++S
Sbjct:  232 QVAMQEEAINDAILREREEEIREINQSVHKVNEIFRDLALIVDKQQTEVDQIGDLVEKSHNHAEKGLDQVQKAAKLQPTCLIS 314          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A7S3Q8K2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8K2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.210e-13
Identity = 51/170 (30.00%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    4 QQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKAN-DYQPSCVVS 172
            Q++  E  +R DA++  A + KLT+D+  V     ++  + ++R   ++A+R                                  ++Q+Q+E +   I++E EEE+++INK +++VNEIY+DLANIV  QQ+ V+E+E + E A+  A+ GL Q++KA+     +C++S
Sbjct:  114 QEKHMETMTRTDASKGRATHVKLTRDYRWVETKFKNIQLECKQRRNAIEAERLAAVEDTNRKQFEKGIDSNNAKH-----------QMQLQDERVTEEIMREREEEVRKINKGMHQVNEIYKDLANIVSYQQDQVDEVEEHMESANKNAESGLKQIEKASAKSDQACIIS 272          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A7R9W8L2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8L2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.770e-12
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   90 RVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPS---CVVS 172
            R Q+QE+ +   I++E EEE++ INK ++ VNEIY+DLA+IV  QQE ++++E N E A    +EGL QV+KAN+   S   C++S
Sbjct:  240 RAQLQEDRLAEEIMREREEEIRNINKGMHTVNEIYKDLAHIVGNQQEQIDQVEANMEDAKVTTEEGLKQVEKANEKADSPYQCLIS 325          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A8J2T2B1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2B1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.170e-12
Identity = 40/82 (48.78%), Postives = 60/82 (73.17%), Query Frame = 0
Query:   90 RVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVV 171
            +V MQ+E I+ A+++E E EL+ IN  ++KVNEI+RDLA +V++QQ+ V++I    E +HA A++GL QVQKA   Q SC +
Sbjct:  165 QVAMQDEDIDEALVREREAELRNINADVHKVNEIFRDLATLVDKQQDDVDKIGELVERSHAHAEKGLDQVQKAAANQSSCAL 246          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: B8LCN4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCN4_THAPS)

HSP 1 Score: 71.2 bits (173), Expect = 2.390e-11
Identity = 39/84 (46.43%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   90 RVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPS-CVVS 172
            ++Q+QE+ IN  I++E E E++ I+K +++VNEIY+DLA++V+ QQE V++IET  E        GL  ++KAN+ Q S CVVS
Sbjct:  331 QMQIQEDRINEEIMREREAEIRNIHKGMHQVNEIYKDLAHLVDNQQEGVDQIETQMENTKENTASGLKHIEKANESQQSQCVVS 414          
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Match: A0A4D9D2P6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2P6_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.570e-11
Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   93 MQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 172
            +Q E ++  ++QE EEE+  IN+S+ KVNEI+RDL  +V +QQE ++ IE N + +HA A+ GL QV KA  YQ  C +S
Sbjct:  216 LQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11017.1390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPU1_ECTSI3.720e-77100.00Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5L0B7_9PHAE2.000e-7594.77t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835ZJ40_9STRA1.720e-2544.38t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y8W0_AURAN1.150e-1757.83t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3JXJ1_9STRA3.700e-1655.42Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3Q8K2_9STRA4.210e-1330.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9W8L2_9STRA4.770e-1246.51Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J2T2B1_9STRA8.170e-1248.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8LCN4_THAPS2.390e-1146.43Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A4D9D2P6_9STRA3.570e-1147.50t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..144
NoneNo IPR availableGENE3D1.20.5.110coord: 105..169
e-value: 4.6E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 19..166
NoneNo IPR availablePANTHERPTHR19957:SF38LD23667Pcoord: 19..166
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 95..162
e-value: 1.4E-7
score: 41.2
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 100..162
score: 14.477
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 25..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11017contigEcto-sp8_S_contig11017:3424..6127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11017.1390.1mRNA_Ecto-sp8_S_contig11017.1390.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11017 2088..6130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11017.1390.1 ID=prot_Ecto-sp8_S_contig11017.1390.1|Name=mRNA_Ecto-sp8_S_contig11017.1390.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=173bp
MRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMRE
VDAQRQSQVEEDEERARVAFAGAGGGQPQGMMQVQQRRERVQMQEEAINT
AIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHA
RAQEGLVQVQKANDYQPSCVVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE