prot_Ecto-sp8_S_contig10991.1358.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10991.1358.1
Unique Nameprot_Ecto-sp8_S_contig10991.1358.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length327
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10991.1358.1 vs. uniprot
Match: A0A6H5JMQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ8_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 2.510e-170
Identity = 264/295 (89.49%), Postives = 269/295 (91.19%), Query Frame = 0 
Query:    1 MSGSSGGGSSDHRGTPSKGGRSDTNGTVSHTTLQQVGVYSGSYAVPGVFGGQTF--QHGGGSAPRPPSVSAPTATPSQPPQAAGSINGTTNHMVLDNDPSLHHPPAVTSVAWGGAAIASPAVLFGQQESVPATSALQFAQLGQQLLPQQQVHGFGGIGSSVAPAALVPPAQLVGIHPTASLTTTTSVDTGVSTHVVDGGVAGGGAMASVLQQHPPPPLSDIGGAVVPLPVANSGPTFTFNGXXXXXXGIDPLTRPVFQPGFNPTALQNQQQPAPVFTTPPSTGFPLSAFVGEQQQ 293
            MS SSGGGSSDHRGTPSKGGRSDTNGTVSH T QQ GVYSGSYAVPGVFGGQT   QHGGGSAPRPPSVSAP A PSQPPQAAGSI  T NHMVLDNDPSL HPPAVTSVAWGGA IASPAVLFGQQES+ ATS LQFAQLGQQLLPQQQ+HGF GIGSSVAPAALVPPAQL GIHPTASLT+TTSVDT VSTHVVD GVAGGGA+ SVLQQHPPPPLSDIGGAVVPLPVANSGPT+TFNG  XXXX  DPLTRPVFQPGFNPTALQNQQQPAPVFTTP STGFPLSAFVGEQQQ
Sbjct:    1 MSSSSGGGSSDHRGTPSKGGRSDTNGTVSHVTSQQAGVYSGSYAVPGVFGGQTVTSQHGGGSAPRPPSVSAPPAAPSQPPQAAGSIKSTANHMVLDNDPSLDHPPAVTSVAWGGATIASPAVLFGQQESIAATSTLQFAQLGQQLLPQQQLHGFRGIGSSVAPAALVPPAQLAGIHPTASLTSTTSVDTAVSTHVVDCGVAGGGAVTSVLQQHPPPPLSDIGGAVVPLPVANSGPTYTFNGGGXXXXVSDPLTRPVFQPGFNPTALQNQQQPAPVFTTPSSTGFPLSAFVGEQQQ 295
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BLAST of mRNA_Ecto-sp8_S_contig10991.1358.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.330e-25
Identity = 84/189 (44.44%), Postives = 86/189 (45.50%), Query Frame = 0 
Query:    1 MSGSSGGGSSDHRGTPSKGGRSDTNGTVSHTTLQQVGVYSGSYAVPGVFGGQTFQHGGGSAPRPPSVSAPTATPSQPPQAAGSINGTTNHMVLDNDPSLHHPPAVTSVAWGGAAIASPAVLFGQQESVPATSALQFAQLGQQLLPQQQVHGFGGIGSSVAPAALVPPAQLVGIHPTASLTTTTSVDTGV 189
            MSGSSGGGSSDHRGTPSKGGRSDT GT                                                                                                   SVPATSALQFAQLGQQLLP QQ+HGFGGIGSSVAPAALVPPAQL GIHPTASLTT TSVDTG+
Sbjct:    1 MSGSSGGGSSDHRGTPSKGGRSDTYGT---------------------------------------------------------------------------------------------------SVPATSALQFAQLGQQLLPHQQLHGFGGIGSSVAPAALVPPAQLAGIHPTASLTTATSVDTGL 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10991.1358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMQ8_9PHAE2.510e-17089.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K6_ECTSI4.330e-2544.44P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10991contigEcto-sp8_S_contig10991:3247..5540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10991.1358.1mRNA_Ecto-sp8_S_contig10991.1358.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10991 3034..5540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10991.1358.1 ID=prot_Ecto-sp8_S_contig10991.1358.1|Name=mRNA_Ecto-sp8_S_contig10991.1358.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=327bp
MSGSSGGGSSDHRGTPSKGGRSDTNGTVSHTTLQQVGVYSGSYAVPGVFG
GQTFQHGGGSAPRPPSVSAPTATPSQPPQAAGSINGTTNHMVLDNDPSLH
HPPAVTSVAWGGAAIASPAVLFGQQESVPATSALQFAQLGQQLLPQQQVH
GFGGIGSSVAPAALVPPAQLVGIHPTASLTTTTSVDTGVSTHVVDGGVAG
GGAMASVLQQHPPPPLSDIGGAVVPLPVANSGPTFTFNGGGGGGGGIDPL
TRPVFQPGFNPTALQNQQQPAPVFTTPPSTGFPLSAFVGEQQQRQKAAPV
FMIPPSTGLAPSACGGEQQQLMVMPVI
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