prot_Ecto-sp8_S_contig10978.1343.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10978.1343.1
Unique Nameprot_Ecto-sp8_S_contig10978.1343.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length160
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: D8LBE9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE9_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 7.730e-97
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MKSFLFVALILLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            MKSFLFVALI+LAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLL+KNKRPASYRLSCCTMVSGPVTVQTKP
Sbjct:    1 MKSFLFVALIVLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A836CNT2_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.090e-39
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 0 
Query:   14 AVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            +V+  +  F+VAP+    V+R + +  +MLFG           I V VQQK  FK+T + +    NLRKALM   I+IYPLQGKIYNCGGGGSCGTC VNV AG  NCSPKGP EKKLL    +P +YRLSCCT V+G +TV TKP
Sbjct:   15 SVMLAAEAFLVAPALQRPVQRDTLTP-RMLFGKKAAPAKSKG-IEVTVQQKY-FKDTVVAMEQPGNLRKALMGAGIEIYPLQGKIYNCGGGGSCGTCTVNVVAGGNNCSPKGPAEKKLL--GNKPETYRLSCCTKVNGNITVATKP 155
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A7S2UXM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.920e-37
Identity = 74/154 (48.05%), Postives = 94/154 (61.04%), Query Frame = 0 
Query:    6 FVALILLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            F  +I L   +  ++ F+    +   V+  S + +QMLFG             + V+Q+ GF + +L   G  NLRK LM  KIDIYPLQGK+ NCGGGG CGTCAV V  GA N SPK P EKK+L  +K+P +YRLSCCT VSG  TV+TKP
Sbjct:    3 FTVVIFLVCAISGASAFLGQSLALNRVQASSSTSLQMLFGSKKKAAPVKGKYSITVKQR-GFTDFDLETEGTANLRKTLMAQKIDIYPLQGKLTNCGGGGVCGTCAVEVMDGANNLSPKAPNEKKVL--SKKPENYRLSCCTRVSGACTVRTKP 153
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: W7TM71_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM71_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.540e-29
Identity = 61/103 (59.22%), Postives = 70/103 (67.96%), Query Frame = 0 
Query:   59 VKVQQKTGFKETELTL--AGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            V VQQK  +K  EL +      NLRK LM NKIDIYPLQGKIYNCGGGG CGTCA+ +  GA+N +PK P E K L   K+    RL+CCT  SG VTV+TKP
Sbjct:   58 VTVQQKF-YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALG-GKKGDDIRLACCTRASGDVTVKTKP 158
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: M1VFK1_CYAM1 (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VFK1_CYAM1)

HSP 1 Score: 108 bits (270), Expect = 9.920e-27
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:   78 TNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            +NLRK L++NKID+Y L+GK+ NCGGGG CGTC V++  G  N +P+G  E ++ E  + P S+RLSCCT + GP+TV+TKP
Sbjct:  109 SNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: UPI00055BF685 ((2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055BF685)

HSP 1 Score: 96.7 bits (239), Expect = 4.300e-23
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0 
Query:   70 TELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            TE+  A  +NLR+  + N +DIY L+GK+ NCGG G C TC V++  G +N SP+   E+K L   K+P SYRLSC T+V GP+TV+TKP
Sbjct:   17 TEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRL--GKKPDSYRLSCQTVVKGPITVRTKP 104
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A835YVE2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.800e-22
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0 
Query:   79 NLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            NLRK L+DNK+D+Y    K+  CGGGG+CGTC V V  G +NCS KG GE+K+L+     A  RL+CCT V+GPV+V  KP
Sbjct:   40 NLRKLLLDNKVDLYKPLDKLKQCGGGGTCGTCRVRVTEGMENCSKKGLGEEKMLKAVG--ADIRLACCTRVTGPVSVTVKP 118
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BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A218QTJ0_9CYAN (Ferredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A218QTJ0_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 4.700e-21
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0 
Query:   71 ELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            E+  A   NLR   M N IDIY   GK+ NCGGGG+CGTC V +  G +N SP+   E ++L+  K+P +YRL+C T+V+G V+V TKP
Sbjct:   12 EVIAANGANLRLKAMQNNIDIYKFIGKMTNCGGGGNCGTCIVEIVEGIENLSPRTDAENRILK--KKPENYRLACQTVVNGAVSVVTKP 98
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A6P0JWH0_9CYAN ((2Fe-2S)-binding protein n=1 Tax=Kamptonema sp. SIO4C4 TaxID=2607773 RepID=A0A6P0JWH0_9CYAN)

HSP 1 Score: 90.1 bits (222), Expect = 1.490e-20
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:   71 ELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            ++  A   N+R+  + N +D+Y L+GK+ NCGG G CGTC V V  G +N S +   E++ L+  K+PASYRLSC T+V+GPV V+TKP
Sbjct:   15 DVVAADGANMREKALQNGVDLYTLRGKLTNCGGYGQCGTCVVEVIEGMENLSERTQFEERKLK--KKPASYRLSCQTLVNGPVKVRTKP 101
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Match: A0A1Z4LLR8_9CYAN (Ferredoxin n=1 Tax=Calothrix parasitica NIES-267 TaxID=1973488 RepID=A0A1Z4LLR8_9CYAN)

HSP 1 Score: 89.7 bits (221), Expect = 1.880e-20
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:   71 ELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVSGPVTVQTKP 159
            E+  A   NLR   M N IDIY + GK+ NCGG G CGTC V +  G +N SP+   E K+L+  K+P +YRL+C  +VSG V+V TKP
Sbjct:   12 EVVAADGANLRLKAMQNNIDIYKVWGKMMNCGGAGQCGTCIVEITEGIENLSPRTDVENKILK--KKPENYRLACQALVSGAVSVVTKP 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10978.1343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBE9_ECTSI7.730e-9798.74Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CNT2_9STRA1.090e-3954.79Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S2UXM9_9STRA1.920e-3748.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TM71_9STRA4.540e-2959.22Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
M1VFK1_CYAM19.920e-2754.882Fe-2S ferredoxin-type domain-containing protein n... [more]
UPI00055BF6854.300e-2351.11(2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. G... [more]
A0A835YVE2_9STRA1.800e-2255.562Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A218QTJ0_9CYAN4.700e-2149.44Ferredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=... [more]
A0A6P0JWH0_9CYAN1.490e-2048.31(2Fe-2S)-binding protein n=1 Tax=Kamptonema sp. SI... [more]
A0A1Z4LLR8_9CYAN1.880e-2049.44Ferredoxin n=1 Tax=Calothrix parasitica NIES-267 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 98..149
e-value: 7.6E-8
score: 32.2
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 57..159
score: 9.12
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 56..159
e-value: 3.2E-18
score: 67.4
NoneNo IPR availablePANTHERPTHR23426:SF49coord: 67..159
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 67..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.873
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 69..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10978contigEcto-sp8_S_contig10978:1187..3879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10978.1343.1mRNA_Ecto-sp8_S_contig10978.1343.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10978 1187..3879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10978.1343.1 ID=prot_Ecto-sp8_S_contig10978.1343.1|Name=mRNA_Ecto-sp8_S_contig10978.1343.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=160bp
MKSFLFVALILLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGGGGAK
KKGAGGIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYN
CGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKNKRPASYRLSCCTMVS
GPVTVQTKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf