prot_Ecto-sp8_S_contig10962.1331.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10962.1331.1
Unique Nameprot_Ecto-sp8_S_contig10962.1331.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length129
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10962.1331.1 vs. uniprot
Match: D8LK66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK66_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 1.320e-48
Identity = 94/108 (87.04%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:    1 MRCPAAVLVVASAALPCARGFLRPSVVPRRRAAGADASGGSGDIMTCSRRSHTGGAAAAAFGRRSLFMMAEGRLTDGDLDNISLDPSTLDESELQRVEGIRAIQSKMV 108
            MRCPA VLVVASAALPCARGFLRPSVVPRRRAAG DASGGSGDIMTCSRRSHTGGAAAAA GRR LFMMAEGRLTDGDLDNIS          LQRVEGIRAIQSKMV
Sbjct:    1 MRCPAVVLVVASAALPCARGFLRPSVVPRRRAAGTDASGGSGDIMTCSRRSHTGGAAAAAVGRRGLFMMAEGRLTDGDLDNISXXXXXXXXXXLQRVEGIRAIQSKMV 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10962.1331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK66_ECTSI1.320e-4887.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10962contigEcto-sp8_S_contig10962:1291..3370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10962.1331.1mRNA_Ecto-sp8_S_contig10962.1331.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10962 1291..3370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10962.1331.1 ID=prot_Ecto-sp8_S_contig10962.1331.1|Name=mRNA_Ecto-sp8_S_contig10962.1331.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=129bp
MRCPAAVLVVASAALPCARGFLRPSVVPRRRAAGADASGGSGDIMTCSRR
SHTGGAAAAAFGRRSLFMMAEGRLTDGDLDNISLDPSTLDESELQRVEGI
RAIQSKMVEVDEKKLELRRAARKQKEAAQ
back to top