prot_Ecto-sp8_S_contig1087.1253.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1087.1253.1
Unique Nameprot_Ecto-sp8_S_contig1087.1253.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length434
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1087.1253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 95..378
e-value: 5.7E-16
score: 59.9
IPR008615FNIPPFAMPF05725FNIPcoord: 268..311
e-value: 4.2E-8
score: 33.2
coord: 69..109
e-value: 9.2E-7
score: 28.9
coord: 25..66
e-value: 2.8E-7
score: 30.6
coord: 224..265
e-value: 8.9E-6
score: 25.8
coord: 359..401
e-value: 8.0E-9
score: 35.5
coord: 180..223
e-value: 2.0E-5
score: 24.7
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 3..162
coord: 146..310
coord: 234..426
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 13..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1087contigEcto-sp8_S_contig1087:6198..10291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1087.1253.1mRNA_Ecto-sp8_S_contig1087.1253.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1087 6198..10944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1087.1253.1 ID=prot_Ecto-sp8_S_contig1087.1253.1|Name=mRNA_Ecto-sp8_S_contig1087.1253.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=434bp
MMFDSPLENMLWPSSLVKVSLGSNFNQPIHQVTWPASLQNLSFGSLFDQP
IDLATWPTSLTELWFGPSFNQPIHQTVWPPSLELLKFGRGFDQPLDEVAW
PVSLRSLFFFGVVYQALDQVPWPASLQKLLFLGVVRNASIDRVVWPESLS
ILRLGKGFNQSLNGVTWSASLRQLDLSDNFNRSIDGVTWPASLQQLSLGE
NFDQSIGKVSWPPFLQHLNLGYDFNQPVDEVKWPESLQTLDFGQHFNHPI
VVATWPTSLQHISFGLAFNQPIAGVEWPASLQKLDLGELFNQPIAEATLP
ANLQQLRFGSFGSQFNQPVDRVRWPASLRSLEFGIFFNQPVDRVCWPASL
RTLMFKRDFNQPITGTTWPALLRKLEFGRDFNQPIAGVVWPVSLQELSFG
KNFDQPVEQVSWPVSLRWLKLPSQPHYELPHGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP