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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1955 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-06_003190.1 |
| Cds size | 1302 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143177.9417727-CDS-Ecto-sp8_S_contig1087:6197..7214 | 1681143177.9417727-CDS-Ecto-sp8_S_contig1087:6197..7214 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1087 6198..7214 + |
| 1681143177.9513817-CDS-Ecto-sp8_S_contig1087:10006..10291 | 1681143177.9513817-CDS-Ecto-sp8_S_contig1087:10006..10291 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1087 10007..10291 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143177.9602842-UTR-Ecto-sp8_S_contig1087:10291..10944 | 1681143177.9602842-UTR-Ecto-sp8_S_contig1087:10291..10944 | Ectocarpus species8 EcLAC_412 | UTR | Ecto-sp8_S_contig1087 10292..10944 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1087.1253.1 >prot_Ecto-sp8_S_contig1087.1253.1 ID=prot_Ecto-sp8_S_contig1087.1253.1|Name=mRNA_Ecto-sp8_S_contig1087.1253.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=434bp
MMFDSPLENMLWPSSLVKVSLGSNFNQPIHQVTWPASLQNLSFGSLFDQP
IDLATWPTSLTELWFGPSFNQPIHQTVWPPSLELLKFGRGFDQPLDEVAW
PVSLRSLFFFGVVYQALDQVPWPASLQKLLFLGVVRNASIDRVVWPESLS
ILRLGKGFNQSLNGVTWSASLRQLDLSDNFNRSIDGVTWPASLQQLSLGE
NFDQSIGKVSWPPFLQHLNLGYDFNQPVDEVKWPESLQTLDFGQHFNHPI
VVATWPTSLQHISFGLAFNQPIAGVEWPASLQKLDLGELFNQPIAEATLP
ANLQQLRFGSFGSQFNQPVDRVRWPASLRSLEFGIFFNQPVDRVCWPASL
RTLMFKRDFNQPITGTTWPALLRKLEFGRDFNQPIAGVVWPVSLQELSFG
KNFDQPVEQVSWPVSLRWLKLPSQPHYELPHGI* back to topmRNA from alignment at Ecto-sp8_S_contig1087:6198..10944+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig1087.1253.1 ID=mRNA_Ecto-sp8_S_contig1087.1253.1|Name=mRNA_Ecto-sp8_S_contig1087.1253.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4747bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1087:6198..10944+ (Ectocarpus species8 EcLAC_412)
ATGATGTTTGACAGCCCATTGGAGAATATGTTGTGGCCGTCGTCGCTGGT
AAAGGTCTCGCTCGGGAGTAACTTTAATCAGCCAATTCACCAAGTTACGT
GGCCAGCATCGCTGCAGAATCTCAGCTTTGGCTCACTGTTCGACCAGCCG
ATCGACCTCGCCACCTGGCCTACATCCCTCACGGAGTTGTGGTTTGGGCC
GAGCTTTAACCAGCCCATCCATCAAACGGTGTGGCCTCCGTCTCTTGAAT
TGCTCAAGTTTGGGAGAGGCTTCGACCAGCCTTTGGACGAGGTCGCCTGG
CCGGTATCCTTGAGATCACTGTTTTTCTTCGGTGTAGTGTATCAAGCTCT
CGACCAGGTTCCTTGGCCAGCATCGCTTCAGAAGTTGCTATTTTTAGGCG
TGGTGAGGAACGCCTCTATCGACCGCGTCGTGTGGCCCGAGTCGCTCAGT
ATTTTAAGGTTGGGAAAGGGCTTCAACCAGTCACTAAATGGGGTCACTTG
GAGCGCGTCGCTTCGGCAGCTGGACCTGAGCGACAACTTCAACCGGTCAA
TCGATGGAGTTACGTGGCCCGCGTCACTGCAGCAGCTTTCGCTCGGGGAG
AATTTTGATCAGTCGATTGGCAAAGTTTCGTGGCCACCATTTCTGCAGCA
CCTCAACCTTGGGTATGATTTCAATCAACCGGTGGATGAGGTGAAGTGGC
CTGAATCCCTGCAAACGCTGGACTTTGGGCAGCACTTCAACCATCCCATT
GTTGTAGCCACGTGGCCGACGTCCCTTCAGCATATCTCGTTCGGGCTCGC
GTTTAACCAGCCCATCGCCGGCGTCGAGTGGCCTGCATCCCTTCAAAAGT
TGGATTTGGGCGAGCTGTTCAATCAACCAATCGCTGAAGCGACGCTGCCG
GCCAACCTCCAGCAGCTGCGGTTCGGGTCGTTCGGTTCCCAATTCAACCA
GCCTGTGGACAGGGTCCGTTGGCCCGCGTCACTGCGATCGCTTGAGTTCG
GGATATTCTTCAACCAGGTACAGCGTGTAGTGGCGACGGTTCAAGAGAAA
TTATTTTGGAGAGCATACGAATTTGTGAGAGCAAAGACGCTTGTTCTGGC
CACAAGAATCACATACTTGTTGCAGTATTATTTTGTTGAACTCTTTGAAA
GAAAAAATTGAAAATATAATTTATTCTAGGGCATCAAGGACCCCGCCGCC
CACTTCTGGCCACAAGAAACACATACTTGTTGCAGTATTATTTTGTTGAA
CTCTTTGAAAGAAAAATTTAAAAATATAATTTTTCTAGGGCATCAAGGGC
CCCTCCGCCCCCAGTGGGCGGCGGGGCCCGAATCGCAAGGCGAAACAGGC
GGGTAAGCATTGTACAAAGAGAATACCAAAAATTTTAGTGGAGGAGCGTA
TCGACTGTTTGTAACATGGAAGTTAATGCGCATGACCGACGCGGAAAATG
GCAGTGTGTGCGGGTCGAGAAATCTGACGTCTGGGCTTTCGCAGTTAACC
AATGAAGGTATGCTACTACAGCAGTAGCATGTCTTATGACATCAAAACAA
CGCCTGTGTGGACAGGGAGGATTTTCGGGACACTTGCAGATGCTACCCTT
ACATTAGGCAGAGCTTGCAACGCCGCATGTACGCGTGCGGAACCGCACGT
GGTAGGACACTAACGTAGTATCAAAAGCAAATCACGGAAGAAAAAGGGGC
GGAAACGACAAATAGTGGGATGAGCGAGCGCGCTGGAGGAATGAATGGAG
GAAATGCTACAAAACGATTTCGTGGATAACGTGTAGGTGGTGCGTCAGAC
ATGGATGTTATAGAAATCAATGAGCAAAATGTATGTCCAGAGTCTTCTGT
ATGCAAGTGAAGAAGTTTCCTACACCACATTTCAGTGTTTTTCGCAAATG
TGCATATGCCACTTAGCGACGTCTGGCGTGTAGACACAGCACAGACTGCG
CGACAAACACAGCCTTCCACTGTTTTACAGCAGGTGTTCACCCTTCTACG
TGTGAGACGCTGCAGGTAATGGCAGAATTTCTGGGAAGCTTGACCGCGCG
TGCAGCGCGAGCATATCGATGTGAAAAAAAACATCTAGATCCCGAGCCCA
TACATATGAACTGCTGTACGATTGATATAGATTGCCACATCAGTGGTGAT
ACCGAGTTCTGTGCAAAAAATCGACGTTAGGGGTCAAGCCATGAAATCAC
CAATTGAGCGATACGCACCGTCTCCCACTGCTGCAGCCTATGTGCGCCCG
AATGTGACACTGCATTTCATGGCTGAAATGTTGTACGGAACGTTACCTGA
GCGTGGGGCGCCAGCATATCGATGTGCACAACAATCATCATCGCCTACCT
TCACGTGCAGCGCCAACACGCTGTGCACCGCTTCTGTTTCGCCGTCTGTG
ATGTCAATACGTCCATGTTGACAGCACGTCAGGCCATACTGTAACATTTT
ACCCTTGTTGTGGGCTGCACACCGAAATCTGGTTGATGATCAGCAACATA
TCATGCGGTCGTTCATCTCATCATGTCGACGAGTTCTGCTGCCGGCCAAT
GTGTCTCGCCGTGACCTGCAGTGACACACACGCGGAAGGGCGCAATTCCT
GCTTGCTACATAGCACAAAGGCTGTGTGTATCACAGAGCAGCGTGTATCG
CGCAGTCCGGGTTGGCTTTGTCCCCGGACGCCGATATCACCGTACTGAAG
TGATTATGCACACCGTATATGGTAACTTCTAAGACAAACGTTTGTTCTGG
GTATTCAGCCGTGACCTGCAATGGCACACAGGAGGGCGCATGAACTACTG
TACAATAGTAGGAGGCCATGTGAATTGCGCAGTCGCTGTTGTAGCATCAC
CGCAGACCTCGATTTTTGTGGGTTAGGGTTATACTCCCGTCGCAAGAGAG
GAAAATATCTCTTCATGTCGATTAATGTTAACGGCCACGCGCATGGAAAA
ATGTTGGCGTCTTAATGGCAGATGAACGACGGACAGGCGTTTTACATGTG
ATCGCTTGTGACGAGGGCGCATGGTACATGCGGTGCATGGTATTTTAACG
AAAGTATAATTTGCAGAATCTCCGAAGTGGCATATTTGTTCGTTTCGAGG
TATTTCGTCATGTCTACCGCGCGAAGCAGCCTGCACAAGTTCGCCACAAC
GTAAAAATGCAGACGCACTCATGACAGGGTTGCAGAGAGACGCGAAACTA
GCACATACTTGCATGAGATGAGAACATGTGTTAGATTGCAAGTATCTTTT
TTCGAGTCAAGTCGTGATGTATGTGATGAATCCGTCTCACAGCATCTTCA
GCCGGTGTCGCACGGATGCAATCAAGCATGTAACACCGTATCAACTCCAA
AGTTGAGTACACGTCGTCGTTGGTGCACGATAGTTCGTTAGACATGTGGT
GGCCACAACCCTAGGCATCCGTCGCAACGTTGACTGCTGCGTGGCCCGAG
CAAACAAAGTATAGACGGCCTCGATTTGGTGTACAGGCAGAACGTGGTCG
CCACAATGCCAAATCAACACCAAAAGCACACGTGACCTATCGACAAGTGC
ACTCGTGACAGGGTGTGACGATGGCACGTAAAGGTTGGGTACACATCGTC
GTTGCTGCACCAAAGTTCGTGCGACATGTGGTGGCCACAACGCTAGGCAT
TTCATCGCAACGTATAATTGGGGTGGACCAAAAACAAAACAAAATTGGTG
TACAGTACACCAAAATGAAGCCTAATGACTCGCGACATCCTGTGAGAAGT
AATAAATATAATAATGTAACTTGATACTACAACATCCCCCCGGTTTGCCT
CTCCAACAGCCTGTGGACAGGGTCTGTTGGCCTGCGTCACTGCGAACGCT
GATGTTCAAACGGGACTTCAACCAGCCGATCACTGGTACAACGTGGCCGG
CGTTGCTGCGAAAGCTAGAGTTTGGGCGGGACTTCAACCAGCCTATCGCC
GGAGTCGTGTGGCCAGTTTCGCTGCAAGAGTTGAGCTTTGGCAAAAACTT
TGACCAGCCAGTGGAGCAGGTCTCATGGCCAGTCTCCTTGAGGTGGCTGA
AGCTCCCCAGCCAGCCGCACTATGAGCTACCACACGGTATTTAATCTGTA
GTCTCGCTATTGGGGCGCGCTCGACTGACGAATAGGCGCTCCGGAGCGGG
AACCAACCAGCGGTCGGTTTGCAAGCGTTCTCTGAGCGGTGAACGGCGGT
GTGAACATCCCACACCTGTGTATACAAAGTGGATGACTTAGGGTCCTTCA
TTTGTACGTTTTTTATGCGAACGTAACGTAACTCGTAAGAGGCTACCATT
TATGACTTCAGGGCACTTCACTGTCGTTATGAAATTGCCACTCCACGACA
TGGAGTGACTTCATGACCGACAGTAATTCAATCGTGGTCTCATAGCGGCC
GAGCAGTTGTTTGTGCTGTGTCGTACTGGTGATTGTTGCTGTTGTTCAAG
GAGGGTGCGCGAAGTGGTTAGAAGGGGGTGAAAACTCGGGCCAGGTTGTT
GAGGTGCTGGGAATCTAACACTCCTGCAGGATCCTGGGTATTAATTTGTT
GCTCATCGATTCGCCGGCCCAAATGACCAACACCCCGTGTGACTGCTGCT
TCTATATGGAGTCTAGGCTATGCCATTCGACCTCGGTGTCTCTACGCTTT
TGTTTCGTACGAAGGATGATACTGTAGTTTGCTGGGACGGTCAACCACGA
CAGGTGCCCCTAGAACTAACGGTTTGTCTGGGGAAGGTACTCATGGC back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig1087:6198..10944+ >mRNA_Ecto-sp8_S_contig1087.1253.1 ID=mRNA_Ecto-sp8_S_contig1087.1253.1|Name=mRNA_Ecto-sp8_S_contig1087.1253.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1087:6198..10944+ (Ectocarpus species8 EcLAC_412)
ATGATGTTTGACAGCCCATTGGAGAATATGTTGTGGCCGTCGTCGCTGGT
AAAGGTCTCGCTCGGGAGTAACTTTAATCAGCCAATTCACCAAGTTACGT
GGCCAGCATCGCTGCAGAATCTCAGCTTTGGCTCACTGTTCGACCAGCCG
ATCGACCTCGCCACCTGGCCTACATCCCTCACGGAGTTGTGGTTTGGGCC
GAGCTTTAACCAGCCCATCCATCAAACGGTGTGGCCTCCGTCTCTTGAAT
TGCTCAAGTTTGGGAGAGGCTTCGACCAGCCTTTGGACGAGGTCGCCTGG
CCGGTATCCTTGAGATCACTGTTTTTCTTCGGTGTAGTGTATCAAGCTCT
CGACCAGGTTCCTTGGCCAGCATCGCTTCAGAAGTTGCTATTTTTAGGCG
TGGTGAGGAACGCCTCTATCGACCGCGTCGTGTGGCCCGAGTCGCTCAGT
ATTTTAAGGTTGGGAAAGGGCTTCAACCAGTCACTAAATGGGGTCACTTG
GAGCGCGTCGCTTCGGCAGCTGGACCTGAGCGACAACTTCAACCGGTCAA
TCGATGGAGTTACGTGGCCCGCGTCACTGCAGCAGCTTTCGCTCGGGGAG
AATTTTGATCAGTCGATTGGCAAAGTTTCGTGGCCACCATTTCTGCAGCA
CCTCAACCTTGGGTATGATTTCAATCAACCGGTGGATGAGGTGAAGTGGC
CTGAATCCCTGCAAACGCTGGACTTTGGGCAGCACTTCAACCATCCCATT
GTTGTAGCCACGTGGCCGACGTCCCTTCAGCATATCTCGTTCGGGCTCGC
GTTTAACCAGCCCATCGCCGGCGTCGAGTGGCCTGCATCCCTTCAAAAGT
TGGATTTGGGCGAGCTGTTCAATCAACCAATCGCTGAAGCGACGCTGCCG
GCCAACCTCCAGCAGCTGCGGTTCGGGTCGTTCGGTTCCCAATTCAACCA
GCCTGTGGACAGGGTCCGTTGGCCCGCGTCACTGCGATCGCTTGAGTTCG
GGATATTCTTCAACCAGCCTGTGGACAGGGTCTGTTGGCCTGCGTCACTG
CGAACGCTGATGTTCAAACGGGACTTCAACCAGCCGATCACTGGTACAAC
GTGGCCGGCGTTGCTGCGAAAGCTAGAGTTTGGGCGGGACTTCAACCAGC
CTATCGCCGGAGTCGTGTGGCCAGTTTCGCTGCAAGAGTTGAGCTTTGGC
AAAAACTTTGACCAGCCAGTGGAGCAGGTCTCATGGCCAGTCTCCTTGAG
GTGGCTGAAGCTCCCCAGCCAGCCGCACTATGAGCTACCACACGGTATTT
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