prot_Ecto-sp8_S_contig10837.1224.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10837.1224.1
Unique Nameprot_Ecto-sp8_S_contig10837.1224.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length190
Homology
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 4.650e-90
Identity = 143/156 (91.67%), Postives = 145/156 (92.95%), Query Frame = 0
Query:    2 GDGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPVRSLRRWLRNHERGPGAAVAQTAPPGGPTGGGVEMGSGGATSGVLSEPVVATTSGLVDXXXXXXXXGVDVAADGRDADRPRAAS 157
            G+GVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGL+GSSA PVRSLRRWLRNHERGPGA VAQTAPPGGPTGG VEMGSGGATSGVLSEPVVA TSGLV    XXX  GVDVAADG DADRPRAAS
Sbjct:  145 GEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLVGSSAVPVRSLRRWLRNHERGPGAVVAQTAPPGGPTGGEVEMGSGGATSGVLSEPVVARTSGLVGGGSXXXFGGVDVAADGGDADRPRAAS 300          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 3.680e-80
Identity = 136/158 (86.08%), Postives = 139/158 (87.97%), Query Frame = 0
Query:    2 GDGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPVRSLRRWLRNHERGPGAAVAQTAPPGGPTGGGVEMGSGGATSGVLSEPVVATTSGLVDXXXXXXXXGVDVAADGRDADRPRAASPG 159
            G+GVEEEA CAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESK G LGSSAAP RS+RRWLRNHERGPGAAVAQTAP GGP GGGVEMGSGG T GVLSEPVVA+ SGLV     XXXX V VAADG D DRPRAAS G
Sbjct:  347 GEGVEEEAMCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKVGPLGSSAAPFRSVRRWLRNHERGPGAAVAQTAPSGGPPGGGVEMGSGGETGGVLSEPVVASMSGLVGDGSGXXXXXVGVAADGGDPDRPRAASLG 504          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A7S3V245_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V245_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.010e-13
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    7 EEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPVRSLRRWLRNHERGP 88
            E  TCAIC+C+ E+G  +R+LPC H+FHA C+DVWL ++  CP CK+ +     + K  +      PV  +  + R   R P
Sbjct:  632 ESDTCAICICDYEEGDQVRLLPCQHYFHAECIDVWLRKNKACPMCKRDIVEGLEQGKEVVQSGVIVPVADMAPYNRRRRRRP 713          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A5J9V0K8_9POAL (RING-type domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V0K8_9POAL)

HSP 1 Score: 75.9 bits (185), Expect = 3.420e-13
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    6 EEEATCAICLCEEEDGQDLRVLP-CGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPV 74
            ++EA CA+CL + EDG+  R LP CGH FHAGCVD+WLA   TCP C+  +  P     A  L  +  PV
Sbjct:  135 DDEAKCAVCLAKLEDGEAARFLPRCGHGFHAGCVDMWLASHTTCPLCRLTIAKPDVTLPASALAPALPPV 204          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A5J9V187_9POAL (RING-type domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V187_9POAL)

HSP 1 Score: 75.9 bits (185), Expect = 5.100e-13
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    6 EEEATCAICLCEEEDGQDLRVLP-CGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPV 74
            ++EA CA+CL + EDG+  R LP CGH FHAGCVD+WLA   TCP C+  +  P     A  L  +  PV
Sbjct:  183 DDEAKCAVCLAKLEDGEAARFLPRCGHGFHAGCVDMWLASHTTCPLCRLTIAKPDVTLPASALAPALPPV 252          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A7S2V3V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3V2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.680e-12
Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    1 GGDGVEEEATCAICLCEEEDGQDLRVLPCGHF-FHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLLGSSAAPVRSLRRWLRNHERGPG 89
            G D VE+E  C ICL   E+G+++RVL CGH  +H  C+D WL Q   CP CK  VEPPS    +    SS+ P R+LR  +      PG
Sbjct:   20 GDDSVEDEE-CPICLVPLEEGEEVRVLKCGHCSYHMSCLDAWLHQRAWCPLCKAKVEPPSPPHASS---SSSPPGRTLRPSVNTITATPG 105          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A835TAK0_CHLIN (RING-type domain-containing protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TAK0_CHLIN)

HSP 1 Score: 75.5 bits (184), Expect = 1.800e-12
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    3 DGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 55
            DGV+   TCAICLCE EDG+ ++ LPC HF+H  C+D WL +  TCP CK  V
Sbjct: 1843 DGVDAADTCAICLCEFEDGERVKHLPCKHFYHIACIDTWLGRDITCPLCKDNV 1895          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A2H2HU33_CAEJA (RING-type domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2HU33_CAEJA)

HSP 1 Score: 75.1 bits (183), Expect = 1.830e-12
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    3 DGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVE 56
            DG EEE TC +CLC  EDG+++R LPC HFFH  C+D WL  +  CP C++ ++
Sbjct:  397 DGEEEEETCTVCLCGYEDGENVRKLPCKHFFHPNCIDKWLDINKRCPMCREEID 450          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 69.7 bits (169), Expect = 2.150e-12
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    4 GVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 55
            G   +  C ICLCE   G++LRVLPC H FHA CVD WL Q+P+CP C+  V
Sbjct:   40 GNSRQCDCRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91          
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Match: UPI0010AA4F3E (probable E3 ubiquitin-protein ligase ATL45 n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AA4F3E)

HSP 1 Score: 70.9 bits (172), Expect = 2.650e-12
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    8 EATCAICLCEEEDGQDLRVLP-CGHFFHAGCVDVWLAQSPTCPFCK 52
            E TCA+CLCE  DG+++RVLP C H FH GC+D+WL+    CP C+
Sbjct:   55 EGTCAVCLCEFTDGEEIRVLPECAHLFHVGCIDMWLSSHSNCPLCR 100          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10837.1224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6J3_ECTSI4.650e-9091.67Similar to ring finger protein 167 isoform 1 n=1 T... [more]
A0A6H5JXB7_9PHAE3.680e-8086.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3V245_9STRA1.010e-1339.02Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5J9V0K8_9POAL3.420e-1348.57RING-type domain-containing protein (Fragment) n=1... [more]
A0A5J9V187_9POAL5.100e-1348.57RING-type domain-containing protein (Fragment) n=1... [more]
A0A7S2V3V2_9STRA1.680e-1244.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835TAK0_CHLIN1.800e-1256.60RING-type domain-containing protein n=2 Tax=Chlamy... [more]
A0A2H2HU33_CAEJA1.830e-1251.85RING-type domain-containing protein n=1 Tax=Caenor... [more]
A0A8C3ZMD8_9TELE2.150e-1255.77RING-type domain-containing protein n=1 Tax=Dentic... [more]
UPI0010AA4F3E2.650e-1256.52probable E3 ubiquitin-protein ligase ATL45 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 11..51
e-value: 1.9E-8
score: 44.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 10..52
e-value: 2.0E-13
score: 50.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 11..52
score: 12.401
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 10..52
e-value: 0.0064
score: 8.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..68
e-value: 1.3E-19
score: 71.1
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 6..62
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 6..62
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10837contigEcto-sp8_S_contig10837:5704..6273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10837.1224.1mRNA_Ecto-sp8_S_contig10837.1224.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10837 5704..6274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10837.1224.1 ID=prot_Ecto-sp8_S_contig10837.1224.1|Name=mRNA_Ecto-sp8_S_contig10837.1224.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=190bp
GGDGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPF
CKQPVEPPSTESKAGLLGSSAAPVRSLRRWLRNHERGPGAAVAQTAPPGG
PTGGGVEMGSGGATSGVLSEPVVATTSGLVDGGSGGGSGGVDVAADGRDA
DRPRAASPGGGSSSEEVVTLEEQEEVEEEEEQGQGEPPAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD