prot_Ecto-sp8_S_contig10814.1200.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10814.1200.1
Unique Nameprot_Ecto-sp8_S_contig10814.1200.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length175
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10814.1200.1 vs. uniprot
Match: D7FPP2_ECTSI (Ankyrin repeat domain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP2_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 6.170e-79
Identity = 132/174 (75.86%), Postives = 137/174 (78.74%), Query Frame = 0 
Query:    1 MMERSCRNGSNVEERDDEDAKHVAFLRARVVEAAREGDTPEMKYLMGITAAKRLLAATDESSRWGLLHFSCSRGFLDITTMLLEAGAKALKAVDKHGKTCLHVAIEHDCRDVIELLLDWHPVCDWPRRAKLTLGQTAARAGGHA-TMQLLLRNGLDPNEKGI-RRETPLHQAAR 172
            MMERSCRNGSNVEE DDEDAKHVAFLRARVVEAAREGDTPEMKYLMGITAAKRLLAATDESSRWGLLHFSCSRGFLDITTMLLEAG KALKAVDKHGKTCLHVAIEHDCRDVIELLLDWH                     GHA  ++LLLR+G D   +      TPLH A +
Sbjct:    1 MMERSCRNGSNVEESDDEDAKHVAFLRARVVEAAREGDTPEMKYLMGITAAKRLLAATDESSRWGLLHFSCSRGFLDITTMLLEAGTKALKAVDKHGKTCLHVAIEHDCRDVIELLLDWH---------------------GHAEVIELLLRHGADVTAREAWAGRTPLHYACQ 153
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10814.1200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPP2_ECTSI6.170e-7975.86Ankyrin repeat domain 3 n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 62..91
e-value: 400.0
score: 7.9
coord: 129..158
e-value: 560.0
score: 6.9
coord: 96..125
e-value: 0.56
score: 19.3
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 33..118
e-value: 1.1E-8
score: 35.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 67..174
score: 18.59
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 27..174
e-value: 1.7E-24
score: 88.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 33..172
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 27..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10814contigEcto-sp8_S_contig10814:4595..6581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10814.1200.1mRNA_Ecto-sp8_S_contig10814.1200.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10814 4595..6581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10814.1200.1 ID=prot_Ecto-sp8_S_contig10814.1200.1|Name=mRNA_Ecto-sp8_S_contig10814.1200.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=175bp
MMERSCRNGSNVEERDDEDAKHVAFLRARVVEAAREGDTPEMKYLMGITA
AKRLLAATDESSRWGLLHFSCSRGFLDITTMLLEAGAKALKAVDKHGKTC
LHVAIEHDCRDVIELLLDWHPVCDWPRRAKLTLGQTAARAGGHATMQLLL
RNGLDPNEKGIRRETPLHQAARWH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf