prot_Ecto-sp8_S_contig10775.1156.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10775.1156.1
Unique Nameprot_Ecto-sp8_S_contig10775.1156.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length311
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10775.1156.1 vs. uniprot
Match: A0A6H5JS47_9PHAE (Btz domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS47_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.270e-37
Identity = 165/317 (52.05%), Postives = 170/317 (53.63%), Query Frame = 0 
Query:    1 AAAAAKPATTATATKPSTLTADAKQWTGGKALGGGKPGXXXXXXXXXXXXTTAXAPAAPANXXXXXXAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ELXGGAGGAVTLVQLQQQQLVLQQ----QMQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAHEQSLGQRVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGPMPQPRAQHDFRGSPKGGGYPTAGPPASAVMSPVPTQGLAGAMQLARDGSPMPPLPHPSGSPPILVGQSMPG 311
            AAA AKPAT ATATKPSTLTADAKQWTG KALG GKPG    XXXXXXXX   X       XXXXXX   XXXXXXXXXXXXXXXX                              EL GG+G AVTL QLQQQQLVLQ+    Q Q+A XX                             Q L Q++                  XXXX                                 AGPMPQP AQHD RGSPK GGYPTAGPP SAVMSPVPTQGLAGAMQLARDGSPMPPLPH SGSPPILVGQSMPG
Sbjct:  559 AAAVAKPATAATATKPSTLTADAKQWTGSKALGAGKPGAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEPNETVGATVPGFTPTAAGTAMAGGQAELAGGSGTAVTLAQLQQQQLVLQRAQLIQAQQAQXXAL-------------------------RNQQLQQQLTHSPPPPRGHGLNPAPPAXXXX---------------------------------AGPMPQPLAQHDVRGSPKVGGYPTAGPPVSAVMSPVPTQGLAGAMQLARDGSPMPPLPHASGSPPILVGQSMPG 817
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10775.1156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JS47_9PHAE3.270e-3752.05Btz domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10775contigEcto-sp8_S_contig10775:3905..5917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10775.1156.1mRNA_Ecto-sp8_S_contig10775.1156.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10775 3905..5918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10775.1156.1 ID=prot_Ecto-sp8_S_contig10775.1156.1|Name=mRNA_Ecto-sp8_S_contig10775.1156.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=311bp
AAAAAKPATTATATKPSTLTADAKQWTGGKALGGGKPGAAAAAASTAAAA
TTAAAPAAPANAATTATAVAAKSAAAVSTATATVAGGQSNGATAATVPGF
TPTAAGAAMAGGQAELAGGAGGAVTLVQLQQQQLVLQQQMQRAQLIQAQQ
AQQQALRNQQLQQQEELFRGQLAHEQSLGQRVQQQQQQQEPQKHNGDQPG
NNTQEQQQRQRQQQQLTHSPPPPRGHVLNPPPAATAAAGPMPQPRAQHDF
RGSPKGGGYPTAGPPASAVMSPVPTQGLAGAMQLARDGSPMPPLPHPSGS
PPILVGQSMPG
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