prot_Ecto-sp8_S_contig10759.1141.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10759.1141.1
Unique Nameprot_Ecto-sp8_S_contig10759.1141.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length96
Homology
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 5.360e-49
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 0
Query:    1 MLGTQITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVSETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLRTRGRHL 96
            MLGTQITDIEQLKDLRKNDPER+RG+GDGAMKELTAF AEGKGK+R PVS  DPPA EACLKLFQEVGWVGAVKA+QLYDKGMRSIEDLRT GR L
Sbjct:  329 MLGTQITDIEQLKDLRKNDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDL 424          
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.220e-31
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    2 LGTQITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVSETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLRTRGRHL 96
            LG QIT+I+QLKDLRK++P+R+RG+GD  MKEL+ F+ EG+   R    E DP     CLK+ QEVGWVGAVKAQQLYDKG+RSIEDLRT+G HL
Sbjct:   74 LGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGR-MHRLDGLEADPKLK--CLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHL 165          
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.150e-31
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    2 LGTQITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVSETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLRTRGRHL 96
            LG QIT+I+QLKDLRK++P+R+RG+GD  MKEL  F+ EG+   R    E DP     CLK+FQEVGWVGAVKAQQLYD+G+RSIEDLRT+G HL
Sbjct:  550 LGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELATFYEEGR-MYRLDELEADPKLK--CLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHL 641          
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.740e-26
Identity = 59/96 (61.46%), Postives = 65/96 (67.71%), Query Frame = 0
Query:    1 MLGTQITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVSETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLRTRGRHL 96
            MLGTQITDIEQLK+  +                   F    + + R PVSE DPP +EACLKLFQEVGWVGAVK QQLYDKGMRSIE+LRTRGRHL
Sbjct:  304 MLGTQITDIEQLKETSERGSR--------------PFLPRARAR-RSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHL 384          
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Match: J9HWK2_9SPIT (DNA polymerase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HWK2_9SPIT)

HSP 1 Score: 54.3 bits (129), Expect = 1.980e-6
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    6 ITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVSETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLR 90
            I  ++QLKD        +  IG+G +K+L  + AEG  K R    +TD       L+LF++V  +G  KAQ+L+DK MRSIEDLR
Sbjct:  151 IYSLDQLKD--------VPNIGEGILKKLREYVAEGSIK-RFEFIDTDEKIKT--LQLFEQVWGIGPSKAQELWDKKMRSIEDLR 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10759.1141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G2F7_ECTSI5.360e-4988.54DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
D7G2F8_ECTSI2.220e-3165.26DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE7.150e-3165.26DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JQ91_9PHAE3.740e-2661.46DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
J9HWK2_9SPIT1.980e-642.35DNA polymerase n=1 Tax=Oxytricha trifallax TaxID=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 62..91
e-value: 5.2E-9
score: 35.8
NoneNo IPR availableGENE3D1.10.150.20coord: 58..96
e-value: 3.8E-9
score: 38.2
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 59..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10759contigEcto-sp8_S_contig10759:5209..6080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10759.1141.1mRNA_Ecto-sp8_S_contig10759.1141.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10759 5182..6080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10759.1141.1 ID=prot_Ecto-sp8_S_contig10759.1141.1|Name=mRNA_Ecto-sp8_S_contig10759.1141.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=96bp
MLGTQITDIEQLKDLRKNDPERLRGIGDGAMKELTAFFAEGKGKARPPVS
ETDPPALEACLKLFQEVGWVGAVKAQQLYDKGMRSIEDLRTRGRHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018944DNA_pol_lambd_fingers_domain