prot_Ecto-sp8_S_contig10738.1114.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10738.1114.1
Unique Nameprot_Ecto-sp8_S_contig10738.1114.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length259
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10738.1114.1 vs. uniprot
Match: A0A6H5L4H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H4_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 7.430e-131
Identity = 218/258 (84.50%), Postives = 223/258 (86.43%), Query Frame = 0 
Query:    1 MLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRRCLADSPKDRYSSMEEVCRLLCGIAAGDGGRVDEASAVSAASDYSCDEDVASDSVRTGMILNDIGVCLCSKGETEESERYYKMALLSSEDVFEAYYNLGLLYSTAAFNKFREAQQMFDAATERMSPRDPRRKSSIEHSKAAARKSNYHQSQEVMKALSGKYNCVSPNSSRDRGGGLAAPTGXXXXXXXXXXXSGAMSEGADGDNRRASF 258
            MLVPTCRRDIVEKLGLFITDGELSCKLW SIAGGLQRWSMPFSLAQVLRRCLADSPKDR+SSMEEVCRLL GIAAGDGGR DE SAVSAASDYSCD DVASD +RTGMILNDIGVCLCSKGETEESERYYK+ALLSSE VFEA            FNKFREAQQMFDAATERMS  DPRRK SIEHSKAA RKSNYHQSQE+MKALSG YNCVS NSSRDRG        XXXXXXXXXXXSG MSE ADGDNR+ASF
Sbjct:   83 MLVPTCRRDIVEKLGLFITDGELSCKLWHSIAGGLQRWSMPFSLAQVLRRCLADSPKDRFSSMEEVCRLLRGIAAGDGGRDDEDSAVSAASDYSCDPDVASDRLRTGMILNDIGVCLCSKGETEESERYYKLALLSSEGVFEAXXXXXXXXXXXXFNKFREAQQMFDAATERMSHGDPRRKFSIEHSKAAERKSNYHQSQEIMKALSGSYNCVSSNSSRDRGXXXXXXXXXXXXXXXXXXXSGVMSESADGDNRQASF 340
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BLAST of mRNA_Ecto-sp8_S_contig10738.1114.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 3.510e-89
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0 
Query:    1 MLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRRCLADSPKDRYSSMEEVCRLLCGIAAGDGGRVDEASAVSAASDYSCDEDVASDSVRTGMILNDIGVCLCSKGETEESERYYKMALLSSEDVFEAYYNLGLLYSTAAFNK 158
            MLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRRCLADSPKDRYSSMEEVCRLL GIAAGDGGR DEASAVSAASDYSCDE+VASD VRTGMILNDIGVCL SKGETEESERYYKMALLSSEDVFEAYYNLGLLYSTAAFNK
Sbjct: 1685 MLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRRCLADSPKDRYSSMEEVCRLLRGIAAGDGGRDDEASAVSAASDYSCDENVASDRVRTGMILNDIGVCLSSKGETEESERYYKMALLSSEDVFEAYYNLGLLYSTAAFNK 1842
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10738.1114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4H4_9PHAE7.430e-13184.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN11_ECTSI3.510e-8996.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 45..213
e-value: 8.9E-11
score: 43.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 107..172
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 107..176
score: 10.473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10738contigEcto-sp8_S_contig10738:713..3055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10738.1114.1mRNA_Ecto-sp8_S_contig10738.1114.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10738 681..3055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10738.1114.1 ID=prot_Ecto-sp8_S_contig10738.1114.1|Name=mRNA_Ecto-sp8_S_contig10738.1114.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=259bp
MLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRR
CLADSPKDRYSSMEEVCRLLCGIAAGDGGRVDEASAVSAASDYSCDEDVA
SDSVRTGMILNDIGVCLCSKGETEESERYYKMALLSSEDVFEAYYNLGLL
YSTAAFNKFREAQQMFDAATERMSPRDPRRKSSIEHSKAAARKSNYHQSQ
EVMKALSGKYNCVSPNSSRDRGGGLAAPTGGAARSSHHGGGSGAMSEGAD
GDNRRASFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom