prot_Ecto-sp8_S_contig10736.1111.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10736.1111.1
Unique Nameprot_Ecto-sp8_S_contig10736.1111.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10736.1111.1 vs. uniprot
Match: Q8QKW4_ESV1K (EsV-1-32 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKW4_ESV1K)

HSP 1 Score: 91.3 bits (225), Expect = 5.960e-23
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 0 
Query:    1 MHDVSVLDTTQALVSRHLGSRQALGSSPVLPQAGFDRIFENQFRTHKKF 49
            +HDV V DTTQAL SRHLGSRQALGS+PVLPQAGFDRIFENQFRTH+KF
Sbjct:   40 VHDVGVPDTTQALGSRHLGSRQALGSTPVLPQAGFDRIFENQFRTHQKF 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10736.1111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QKW4_ESV1K5.960e-2387.76EsV-1-32 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10736contigEcto-sp8_S_contig10736:2605..2754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10736.1111.1mRNA_Ecto-sp8_S_contig10736.1111.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10736 2497..2754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10736.1111.1 ID=prot_Ecto-sp8_S_contig10736.1111.1|Name=mRNA_Ecto-sp8_S_contig10736.1111.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp
MHDVSVLDTTQALVSRHLGSRQALGSSPVLPQAGFDRIFENQFRTHKKF*
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