prot_Ecto-sp8_S_contig106734.1044.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig106734.1044.1
Unique Nameprot_Ecto-sp8_S_contig106734.1044.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length126
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: UPI000C75D5C1 (histone H2A-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75D5C1)

HSP 1 Score: 218 bits (555), Expect = 2.820e-71
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAA 123
            MS RGKGGK K KAKSRSSRAGLQFPVGRIHRLLRKGNY+ERVGAGAPVYMAAVMEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQ+VLLPKKSQ A
Sbjct:    1 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQSVLLPKKSQGA 123
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BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A210PR34_MIZYE (Histone H2A n=3 Tax=Mollusca TaxID=6447 RepID=A0A210PR34_MIZYE)

HSP 1 Score: 218 bits (554), Expect = 3.880e-71
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAAK 124
            MS RGKGGK KSKAKSRSSRAGLQFPVGRIHRLLRKGNY+ERVGAGAPVY+AAV+EYLAAE+LELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+ A K
Sbjct:    1 MSGRGKGGKTKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTGATK 124
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A6G1S640_9ACAR (Histone H2A n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S640_9ACAR)

HSP 1 Score: 216 bits (551), Expect = 8.540e-71
Identity = 112/125 (89.60%), Postives = 120/125 (96.00%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAAKE 125
            MS RGKGGK KSKAKSRSSRAGLQFPVGRIHRLLRKGNY+ERVG GAPVY+AAV+EYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK++  K+
Sbjct:    1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKVKQ 125
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: T1K5S4_TETUR (Histone H2A n=4 Tax=Acari TaxID=6933 RepID=T1K5S4_TETUR)

HSP 1 Score: 216 bits (550), Expect = 1.170e-70
Identity = 113/120 (94.17%), Postives = 118/120 (98.33%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKS 120
            MS RGKGGK KSKAKSRSSRAGLQFPVGRIHRLLRKGNY+ERVGAGAPVY+AAV+EYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKS
Sbjct:    1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKS 120
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: H2A_CHITH (Histone H2A n=6 Tax=Bilateria TaxID=33213 RepID=H2A_CHITH)

HSP 1 Score: 216 bits (550), Expect = 1.210e-70
Identity = 112/124 (90.32%), Postives = 120/124 (96.77%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAAK 124
            MS RGKGGK K+KAKSRSSRAGLQFPVGRIHRLLRKGNY ERVGAGAPVY+AAVMEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+++ K
Sbjct:    1 MSGRGKGGKVKAKAKSRSSRAGLQFPVGRIHRLLRKGNYGERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTESKK 124
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A8J1TY96_OWEFU (Histone H2A n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TY96_OWEFU)

HSP 1 Score: 215 bits (548), Expect = 3.180e-70
Identity = 113/122 (92.62%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQA 122
            MS RGKGGKAKSKAKSRS+RAGLQFPVGRIHRLLRKGNY++RVGAGAPVY+AAV+EYLAAEILELAGNAARDNKKSRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKS A
Sbjct:    1 MSGRGKGGKAKSKAKSRSTRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSGA 122
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A1S3K1A6_LINUN (Histone H2A n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K1A6_LINUN)

HSP 1 Score: 215 bits (547), Expect = 3.480e-70
Identity = 110/123 (89.43%), Postives = 120/123 (97.56%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAA 123
            MS RGKGGKA++K KSRSSRAGLQFPVGRIHRLLRKGNY++RVGAGAPVY+AAV+EYLAAE+LELAGNAARDNKKSRI+PRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKS+AA
Sbjct:    1 MSGRGKGGKARAKGKSRSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSKAA 123
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A6P7SRU3_OCTVU (Histone H2A n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SRU3_OCTVU)

HSP 1 Score: 215 bits (547), Expect = 3.480e-70
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAA 123
            MS RGKGGKAK+K+K+RSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVY+AAVMEYL AE+LELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+  A
Sbjct:    1 MSGRGKGGKAKAKSKTRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYLAAVMEYLGAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKAHKA 123
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: UPI001EE53AA4 (histone H2A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE53AA4)

HSP 1 Score: 215 bits (548), Expect = 3.510e-70
Identity = 112/123 (91.06%), Postives = 120/123 (97.56%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQAA 123
            MS RGKGGK K+KAKSRS+RAGLQFPVGRIHRLLRKGNY+ERVGAGAPVY+AAV+EYLAAE+LELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+ AA
Sbjct:    1 MSGRGKGGKTKAKAKSRSTRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKAAAA 123
[Close]
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Match: A0A8B8CWW9_CRAVI (Histone H2A n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CWW9_CRAVI)

HSP 1 Score: 215 bits (548), Expect = 4.010e-70
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0 
Query:    1 MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYMAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSQ 121
            MS RGKGGK K KAKSRSSRAGLQFPVGRIHRLLRKGNY+ERVGAGAPVY+AAV+EYLAAE+LELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+Q
Sbjct:   15 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQ 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106734.1044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C75D5C12.820e-7192.68histone H2A-like n=1 Tax=Eurytemora affinis TaxID=... [more]
A0A210PR34_MIZYE3.880e-7191.94Histone H2A n=3 Tax=Mollusca TaxID=6447 RepID=A0A2... [more]
A0A6G1S640_9ACAR8.540e-7189.60Histone H2A n=1 Tax=Aceria tosichella TaxID=561515... [more]
T1K5S4_TETUR1.170e-7094.17Histone H2A n=4 Tax=Acari TaxID=6933 RepID=T1K5S4_... [more]
H2A_CHITH1.210e-7090.32Histone H2A n=6 Tax=Bilateria TaxID=33213 RepID=H2... [more]
A0A8J1TY96_OWEFU3.180e-7092.62Histone H2A n=2 Tax=Owenia fusiformis TaxID=6347 R... [more]
A0A1S3K1A6_LINUN3.480e-7089.43Histone H2A n=2 Tax=Lingula unguis TaxID=7574 RepI... [more]
A0A6P7SRU3_OCTVU3.480e-7091.06Histone H2A n=2 Tax=Octopus TaxID=6643 RepID=A0A6P... [more]
UPI001EE53AA43.510e-7091.06histone H2A-like n=1 Tax=Haliotis rubra TaxID=3610... [more]
A0A8B8CWW9_CRAVI4.010e-7092.56Histone H2A n=2 Tax=Crassostrea virginica TaxID=65... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 42..57
score: 81.73
coord: 57..70
score: 89.86
coord: 13..35
score: 78.47
coord: 99..117
score: 80.9
coord: 71..85
score: 81.65
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..122
e-value: 1.1E-79
score: 280.8
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..88
e-value: 4.9E-17
score: 62.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..125
e-value: 6.2E-66
score: 222.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..119
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..124
e-value: 4.9E-20
score: 71.0
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..123
NoneNo IPR availablePANTHERPTHR23430:SF214HISTONE H2Acoord: 1..123
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig106734contigEcto-sp8_S_contig106734:76..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig106734.1044.1mRNA_Ecto-sp8_S_contig106734.1044.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig106734 76..483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig106734.1044.1 ID=prot_Ecto-sp8_S_contig106734.1044.1|Name=mRNA_Ecto-sp8_S_contig106734.1044.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=126bp
MSARGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVY
MAAVMEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAGV
TIAQGGVLPNIQAVLLPKKSQAAKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS