prot_Ecto-sp8_S_contig10656.1019.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10656.1019.1
Unique Nameprot_Ecto-sp8_S_contig10656.1019.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: D7FHC9_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC9_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.210e-57
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL 96
            MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL
Sbjct:   52 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL 147          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A8J2WZP9_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZP9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.360e-25
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVML-----WSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLL 87
            MC MCPS+T+QQR+ GF  C   GY LSF+ T+ML     W   +++FA++Y  G+ IAI AT FLIGPRRQC KMF K RR AC+ +L++L
Sbjct:   21 MCSMCPSMTYQQRLIGFCICCGCGYALSFMGTLMLLSKDPWKKRVTNFAILYVFGNFIAIAATGFLIGPRRQCKKMFSKTRRFACIFWLLML 112          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A835YKD4_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.330e-24
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGD---LSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILA 94
            MC  CP+LT+QQRV GFV  + +GY+LSF+ T++L  G    +  FA++Y LG+LIA+  T FLIGP+  C KMFHK RR A + YLV+L  V I A
Sbjct:   28 MCACCPTLTYQQRVIGFVTTMIVGYILSFVGTLLLIGGGPAGIRGFAVLYVLGNLIALSGTGFLIGPKSHCKKMFHKNRRFAAIFYLVMLLVVFIAA 124          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: W7TZX0_9STRA (Vesicle transport protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZX0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.740e-21
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWS---GDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAV 90
            +C MCPSLT+QQR+ GFV C  LGYLLSF+ T+ L S     + +FA +Y +G++IA+ +T FL+GP+ QC KMF K RR + ++Y+++L  V
Sbjct:   35 VCAMCPSLTYQQRMIGFVGCFCLGYLLSFIGTLSLISMTADGIRNFAALYVVGNIIALCSTGFLVGPKSQCKKMFDKTRRYSTILYIIMLIVV 127          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A7S2DTQ9_9EUKA (Vesicle transport protein n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DTQ9_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 3.100e-19
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 0
Query:    5 CPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL 96
            CPSLTF++RV G +ACL +G+++SFL  +  W+G++++FA++Y LG++++I A+ FL GPRRQ   M   KRR A  IYL  +   + LAFL
Sbjct:   65 CPSLTFRERVQGCIACLIVGFVISFLGFISFWTGNITAFAILYTLGNIVSICASGFLFGPRRQLRNMARAKRRWAVGIYLGSMVLTLALAFL 156          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A7S3U763_9SPIT (Vesicle transport protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U763_9SPIT)

HSP 1 Score: 85.9 bits (211), Expect = 1.480e-18
Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    3 EMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL 96
             MCP+LTF+QR+ G + CL  G LLSF+ T++ W+G ++ FA++Y +G++++I  T FLIGP+RQ   M    R+ A +IY  ++F  +I AFL
Sbjct:   71 SMCPNLTFRQRLYGCLGCLVGGILLSFMGTLLWWTGHVAGFAVLYTIGNIVSICGTGFLIGPKRQVRNMCKGSRQYATLIYFTMMFLTLIAAFL 164          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.470e-16
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLS---FLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAF 95
            +C +CP LT+QQR+GG++AC  + + LS   F   V L  G+ + F + Y LG+++AI  + FL GPR QC KM+   RRIA  +YL+ +F  I +AF
Sbjct:   26 LCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAF 123          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A8J2WH84_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WH84_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.600e-16
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    1 MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSG----DLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFL 96
            +CEMCP++TF+QR+   + C  LGY+L    T+ L  G    ++  F+++Y  G+LIAI AT+F +GP+  C KM++  RR A  +YLV L  V++LA L
Sbjct:   64 VCEMCPTMTFKQRLIALICCCVLGYILEICGTLTLIGGPTARNIRKFSVLYVCGNLIAIMATAFWVGPKLMCKKMWNSTRRGATAMYLVSLVLVLVLALL 163          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A7S1TWS6_9STRA (Vesicle transport protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWS6_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 6.740e-16
Identity = 38/91 (41.76%), Postives = 63/91 (69.23%), Query Frame = 0
Query:    3 EMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGD---LSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAV 90
            ++CP LT+QQR+ GF++C  +GYLL+F   + L + D   L++FA+ Y +G+++A+ +  FL+GP +QC KM+ + RRI   +YL L+  V
Sbjct:   33 QVCPDLTYQQRIIGFISCGCIGYLLAFAGAMALLARDEEGLNNFAVFYTMGNVVALCSGLFLMGPGKQCTKMWDETRRITSAVYLSLILIV 123          
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Match: A0A7S4HST6_9STRA (Vesicle transport protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HST6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.270e-15
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    3 EMCPSLTFQQRVGGFVACLALGYLLSFLSTVM---LWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYL 84
            ++CP L++QQR+ GF  C   GYL++F+S  M   L  GD   F LIY LG ++++ ++ FL+GP+RQC  MF K R+   +++L
Sbjct:   40 DLCPKLSYQQRIIGFAVCFGTGYLITFMSFGMFVELAEGDPVPFVLIYTLGHILSLSSSGFLVGPKRQCKNMFDKTRKWTTIVFL 124          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10656.1019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHC9_ECTSI1.210e-57100.00Vesicle transport protein n=2 Tax=Ectocarpus TaxID... [more]
A0A8J2WZP9_9STRA1.360e-2554.35Vesicle transport protein n=1 Tax=Pelagomonas calc... [more]
A0A835YKD4_9STRA6.330e-2452.58Vesicle transport protein n=1 Tax=Tribonema minus ... [more]
W7TZX0_9STRA1.740e-2149.46Vesicle transport protein n=2 Tax=Monodopsidaceae ... [more]
A0A7S2DTQ9_9EUKA3.100e-1947.83Vesicle transport protein n=2 Tax=Haptolina brevif... [more]
A0A7S3U763_9SPIT1.480e-1844.68Vesicle transport protein n=1 Tax=Strombidinopsis ... [more]
A0A7S3JV88_9STRA1.470e-1643.88Vesicle transport protein n=1 Tax=Aureoumbra lagun... [more]
A0A8J2WH84_9STRA4.600e-1643.00Vesicle transport protein n=1 Tax=Pelagomonas calc... [more]
A0A7S1TWS6_9STRA6.740e-1641.76Vesicle transport protein n=2 Tax=Phaeomonas parva... [more]
A0A7S4HST6_9STRA1.270e-1542.35Vesicle transport protein n=2 Tax=Odontella aurita... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 25..102
e-value: 2.1E-19
score: 70.0
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 7..105
NoneNo IPR availablePANTHERPTHR23137:SF28VESICLE TRANSPORT PROTEINcoord: 7..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..36
NoneNo IPR availableTMHMMTMhelixcoord: 78..97
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10656contigEcto-sp8_S_contig10656:5363..6449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10656.1019.1mRNA_Ecto-sp8_S_contig10656.1019.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10656 5363..6473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10656.1019.1 ID=prot_Ecto-sp8_S_contig10656.1019.1|Name=mRNA_Ecto-sp8_S_contig10656.1019.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=107bp
MCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLG
SLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFLVSEK
IDLIIIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2