prot_Ecto-sp8_S_contig106559.1018.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig106559.1018.1
Unique Nameprot_Ecto-sp8_S_contig106559.1018.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 3.180e-21
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV
Sbjct:   31 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A6H5L8V1_9PHAE (AAA_23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8V1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.050e-21
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            MIVGANGCGKTT+IECLKYACTGALPPGARNGQSFVHDPKV
Sbjct:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQSFVHDPKV 41          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A6G0XLJ7_9STRA (AAA_23 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLJ7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-17
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+GANGCGKTTIIECLK ACTG LPPGAR+GQSF+HDPK+
Sbjct:   31 VILGANGCGKTTIIECLKIACTGLLPPGARSGQSFIHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A024GBH2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GBH2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-17
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+G NGCGKTTIIECLK ACTG LPPGARNGQSF+HDPK+
Sbjct:   31 VILGDNGCGKTTIIECLKIACTGTLPPGARNGQSFIHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A024UCA2_9STRA (AAA_23 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCA2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.700e-17
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+GANGCGKTTIIECLK +CTG LPPGAR+GQSFVHDPK+
Sbjct:   31 VILGANGCGKTTIIECLKISCTGLLPPGARSGQSFVHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A835YS38_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS38_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.970e-17
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            MIVG+NGCGKTTIIECL+YA TG LPP +RNGQ+FVHDPK+
Sbjct:   31 MIVGSNGCGKTTIIECLRYATTGILPPNSRNGQTFVHDPKM 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A5D6XIH6_9STRA (AAA_23 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIH6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.440e-17
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+G NGCGKTTIIECLK  CTGALPPGAR GQSFVHDPK+
Sbjct:   31 VILGDNGCGKTTIIECLKIVCTGALPPGARGGQSFVHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: W4FZV4_9STRA (AAA_23 domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZV4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.440e-17
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+GANGCGKTTIIECLK +CTG LPPGAR+GQ+FVHDPK+
Sbjct:   31 VILGANGCGKTTIIECLKISCTGLLPPGARSGQTFVHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A485LSC2_9STRA (Aste57867_24789 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSC2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.440e-17
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+GANGCGKTTIIECLK +CTG LPPG+R+GQSFVHDPK+
Sbjct:   31 VILGANGCGKTTIIECLKISCTGILPPGSRSGQSFVHDPKI 71          
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Match: A0A397D0D9_9STRA (AAA_23 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D0D9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.490e-17
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV 41
            +I+GANGCGKTTIIECLK +CTG LPPGAR+GQ+FVHDPK+
Sbjct:   43 VILGANGCGKTTIIECLKISCTGLLPPGARSGQTFVHDPKI 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106559.1018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G250_ECTSI3.180e-21100.00AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L8V1_9PHAE6.050e-2197.56AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6G0XLJ7_9STRA1.990e-1782.93AAA_23 domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A024GBH2_9STRA1.990e-1782.93Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A024UCA2_9STRA3.700e-1782.93AAA_23 domain-containing protein n=3 Tax=Aphanomyc... [more]
A0A835YS38_9STRA4.970e-1780.49AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A5D6XIH6_9STRA9.440e-1782.93AAA_23 domain-containing protein n=1 Tax=Pythium b... [more]
W4FZV4_9STRA9.440e-1780.49AAA_23 domain-containing protein n=7 Tax=Aphanomyc... [more]
A0A485LSC2_9STRA9.440e-1780.49Aste57867_24789 protein n=1 Tax=Aphanomyces stella... [more]
A0A397D0D9_9STRA9.490e-1780.49AAA_23 domain-containing protein (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..41
e-value: 3.7E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR18867RAD50coord: 1..41
IPR038729Rad50/SbcC-type AAA domainPFAMPF13476AAA_23coord: 2..38
e-value: 3.5E-11
score: 44.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig106559contigEcto-sp8_S_contig106559:156..278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig106559.1018.1mRNA_Ecto-sp8_S_contig106559.1018.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig106559 156..308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig106559.1018.1 ID=prot_Ecto-sp8_S_contig106559.1018.1|Name=mRNA_Ecto-sp8_S_contig106559.1018.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=41bp
MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038729Rad50/SbcC_AAA
IPR027417P-loop_NTPase