prot_Ecto-sp8_S_contig10645.1005.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10645.1005.1
Unique Nameprot_Ecto-sp8_S_contig10645.1005.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length119
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10645.1005.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.270e-65
Identity = 116/119 (97.48%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MGMLVLVLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFSVAGASYKLSACRLGVVEVDLFSGWLRSRGRLPCLGVVLASLDLRVEASFPEGHQDGDAAAAVRKAEA 119
            MGMLV VLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFSVAGASYKLSACRLGVVEVDLFSGWLRSRGRLPCLGVVLASLDLRVEASFPEGH DGDAAAAV KAEA
Sbjct:    1 MGMLVFVLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFSVAGASYKLSACRLGVVEVDLFSGWLRSRGRLPCLGVVLASLDLRVEASFPEGHHDGDAAAAVGKAEA 119
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BLAST of mRNA_Ecto-sp8_S_contig10645.1005.1 vs. uniprot
Match: A0A6H5KIC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIC1_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 8.890e-61
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MGMLVLVLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFSVAGASYKLSACRLGVVEVDLFSGWLRSRGRLPCLGVVLASLDLRVEASFPEGHQDGDAAAAVRKAE 118
            MGMLV VLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFS+AGASYKLSAC+LGVVEVDLFS WLRSRGRLPCLGVVLASL+LRVEASFPE H DGDAAA VRKAE
Sbjct:    1 MGMLVFVLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVSFSIAGASYKLSACQLGVVEVDLFSDWLRSRGRLPCLGVVLASLNLRVEASFPEEHHDGDAAA-VRKAE 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10645.1005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K0_ECTSI1.270e-6597.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIC1_9PHAE8.890e-6193.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10645contigEcto-sp8_S_contig10645:2051..3088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10645.1005.1mRNA_Ecto-sp8_S_contig10645.1005.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10645 1096..3088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10645.1005.1 ID=prot_Ecto-sp8_S_contig10645.1005.1|Name=mRNA_Ecto-sp8_S_contig10645.1005.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=119bp
MGMLVLVLGSLKWALLCFVLVLGVGKAIARVASWVANNACQVWLRRRPVS
FSVAGASYKLSACRLGVVEVDLFSGWLRSRGRLPCLGVVLASLDLRVEAS
FPEGHQDGDAAAAVRKAEA
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