prot_Ecto-sp8_S_contig1064.1003.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1064.1003.1
Unique Nameprot_Ecto-sp8_S_contig1064.1003.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1064.1003.1 vs. uniprot
Match: D8LRI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI0_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.330e-78
Identity = 126/143 (88.11%), Postives = 131/143 (91.61%), Query Frame = 0 
Query:    1 MVMIVSGAVWASIMVTKCVISKVLIWKAFERCKRPDENREHETNSSDEEARDDGEDVPELAQEVDDEXXXDQQPVVCVTKRTLGTLKQGDGREPTPGEDRLQSESSTGDNSLDSRSDGSGEGGDYVPDSTMMMVTDYLFHFYV 143
            MV+IVSGAVWA IMVTKCVISKVL+WKA ERC RPDENREH+TNSSDEEARDDGEDVPELAQEVDDE   DQQPV+  TKRTLGTLKQGDGREPT   DRLQ ESSTGDNSLDSRSDGSGEGGDYVPDSTMMMVTD+LFHFYV
Sbjct:    1 MVIIVSGAVWAGIMVTKCVISKVLVWKALERCVRPDENREHKTNSSDEEARDDGEDVPELAQEVDDEEEEDQQPVIGATKRTLGTLKQGDGREPTSRVDRLQPESSTGDNSLDSRSDGSGEGGDYVPDSTMMMVTDFLFHFYV 143
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1064.1003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRI0_ECTSI1.330e-7888.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1064contigEcto-sp8_S_contig1064:8492..10181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1064.1003.1mRNA_Ecto-sp8_S_contig1064.1003.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1064 8455..10913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1064.1003.1 ID=prot_Ecto-sp8_S_contig1064.1003.1|Name=mRNA_Ecto-sp8_S_contig1064.1003.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp
MVMIVSGAVWASIMVTKCVISKVLIWKAFERCKRPDENREHETNSSDEEA
RDDGEDVPELAQEVDDEEEEDQQPVVCVTKRTLGTLKQGDGREPTPGEDR
LQSESSTGDNSLDSRSDGSGEGGDYVPDSTMMMVTDYLFHFYV*
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