prot_Ecto-sp8_S_contig106198.975.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig106198.975.1
Unique Nameprot_Ecto-sp8_S_contig106198.975.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: D8LNP4_ECTSI (PIH1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP4_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.310e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    2 ISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEV 47
            ISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEV
Sbjct:  174 ISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEV 219          
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: A0A7S2B8J4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8J4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.690e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 ISPRPGFVIKTKLVDKGM-------KVFVNVCQHERIGESSMVKKLDKEGQEV 47
            I+P PGFVIKTK VD+         KVF+N+CQHE + +  M K+L+ EG+EV
Sbjct:  124 ITPEPGFVIKTKRVDQAGTAPGAVGKVFINLCQHEGVEKPVMKKRLNDEGEEV 176          
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: A0A835ZG52_9STRA (Pre-RNA processing PIH1/Nop17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG52_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.720e-6
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 QISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKE-GQEVGV 49
            +++P PGFV+KTK +D G KVF+NVC  + IG     K+LD++ G+EV V
Sbjct:   84 KMTPDPGFVVKTKELDTGCKVFLNVCSSDLIGVPGPCKRLDEDTGEEVEV 133          
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: A0A0G4GEX6_VITBC (PIH1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GEX6_VITBC)

HSP 1 Score: 50.8 bits (120), Expect = 9.510e-6
Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 ISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQ-EVGVQQAA 53
            ++P+P FV+KTK +  GMK+F+N+CQ E +  S   + +D++GQ + GV  +A
Sbjct:   64 VTPKPLFVLKTKDIKSGMKLFINICQSEHLPPSHTQEFIDEQGQPQTGVHMSA 116          
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: A0A7S3HLE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLE1_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.730e-5
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    2 ISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEV 47
            I+P  GF  KT  V  G+KVF+N+ QHE I   ++ KKLD +G+EV
Sbjct:   94 ITPSAGFSYKTSRVADGLKVFINMAQHELIDAPAIKKKLDDKGEEV 139          
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Match: A0A150G8A4_GONPE (PIH1 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G8A4_GONPE)

HSP 1 Score: 48.5 bits (114), Expect = 6.190e-5
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 0
Query:    1 QISPRPGFVIKTKLVDKGMKVFVNVCQHERI 31
            +I+P PGFVIKT     GMKVF+NVC H+R+
Sbjct:   60 EITPEPGFVIKTSDTASGMKVFINVCSHDRV 90          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106198.975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LNP4_ECTSI1.310e-21100.00PIH1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2B8J4_9STRA5.690e-750.94Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835ZG52_9STRA2.720e-650.00Pre-RNA processing PIH1/Nop17-domain-containing pr... [more]
A0A0G4GEX6_VITBC9.510e-641.51PIH1 domain-containing protein n=2 Tax=Vitrella br... [more]
A0A7S3HLE1_9STRA1.730e-550.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A150G8A4_GONPE6.190e-561.29PIH1 domain-containing protein n=1 Tax=Gonium pect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012981PIH1, N-terminalPFAMPF08190PIH1coord: 2..46
e-value: 4.4E-11
score: 42.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig106198contigEcto-sp8_S_contig106198:14..202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig106198.975.1mRNA_Ecto-sp8_S_contig106198.975.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig106198 14..202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig106198.975.1 ID=prot_Ecto-sp8_S_contig106198.975.1|Name=mRNA_Ecto-sp8_S_contig106198.975.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
QISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEVGVQ
QAAFRLVVGISL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012981PIH1_N