prot_Ecto-sp8_S_contig1061.963.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1061.963.1
Unique Nameprot_Ecto-sp8_S_contig1061.963.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length329
Homology
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A6H5L3V5_9PHAE (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3V5_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 2.280e-189
Identity = 311/333 (93.39%), Postives = 318/333 (95.50%), Query Frame = 0
Query:    1 KSYLAVVQGAVDPESVPRREEEPEGWGEGRDGTGXXXXXX--RKRRPDSVQHTPAHGFFQRKKDLLLRAVELGETLSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADAARFQAAQGAPDRGVFRTPGDGEGELRVDASVSEVPGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSDTEAPAKQESXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RGKRYWGRQEVQPAGVAGGKQEVILDVVAPDPFVFVDGELQL 328
            KSYLAVVQGAVDPESVPRREEEP+GW EGRDG GXXXXXX  RKRRPDSVQHTPAHGFFQRKKDLLLRA+ELGETLSPEDLAFSKL+WGDIKFDKAASRPFHSAAKADKIRAVAEA+AARFQAAQGAPDRGVFR PGDG+GELRVDASVSEVPGDFRMRLD+EAGGKGKPSRTFVKVLEHGSYRGR VTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSDTEAPAKQES XXXXXXXXXXXXXXXXXXXXXXXX      RGKRYWGRQ+VQPA V GGKQEVILDVVAPDPFVFVDGELQL
Sbjct:  155 KSYLAVVQGAVDPESVPRREEEPDGWREGRDGNGXXXXXXXXRKRRPDSVQHTPAHGFFQRKKDLLLRAIELGETLSPEDLAFSKLSWGDIKFDKAASRPFHSAAKADKIRAVAEAEAARFQAAQGAPDRGVFRAPGDGDGELRVDASVSEVPGDFRMRLDEEAGGKGKPSRTFVKVLEHGSYRGRLVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSDTEAPAKQESGXXXXXXXXXXXXXXXXXXXXXXXXGGMGGGRGKRYWGRQKVQPARVTGGKQEVILDVVAPDPFVFVDGELQL 487          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A7S2GNM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNM4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.210e-24
Identity = 61/104 (58.65%), Postives = 67/104 (64.42%), Query Frame = 0
Query:  150 VPGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDAD--------HTIPRMCLHAQSLTL----RLAP 241
            VPGDFRMR      G GKPSRT V+V+ HG Y+G+ VTKV++ P TGRRHQLRLH L  GHPILGD TYG A            PRMCLHA  L L    RLAP
Sbjct:    1 VPGDFRMRT-VHGSGVGKPSRTEVRVVAHGLYQGQPVTKVVLHPITGRRHQLRLHLLEAGHPILGDATYGPAACPSDLGEVDEPPRMCLHAHRLYLPFKHRLAP 103          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A5D6YT03_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YT03_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.120e-20
Identity = 79/204 (38.73%), Postives = 101/204 (49.51%), Query Frame = 0
Query:   60 KKDLLLRAVELGETLSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEA----DAARFQAAQGAPDRGVFRTPGDGEGELRVDAS------------VSEVPGD-FRMRLDKEAGGKGKPSRTFVKVLEHGSYR----GRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPP 242
            K  L+      GE L+ ++ A+  L W D+   +A   PF    + DK R VAE     D+ R Q A+      V  + G  E  +   AS            ++E  G+ FRM++  +A   GK S T   VL HG+         VTKVL+RP TGRRHQLRLH  H G PI+GD TYGD D    RM LHA  L L +APP
Sbjct:    3 KARLVRERAAQGEPLTADEQAYVALKWRDLP--RAQQEPFKQHGQRDKERFVAELTAFLDSEREQVARKRKYESVETSSGGAEAGVAAAASAPEPVAYVFEDRIAEPSGEGFRMQIG-DARRPGKASSTLAFVLGHGTRAINGVDEPVTKVLLRPLTGRRHQLRLHLAHNGFPIVGDVTYGDEDDDAQRMLLHAWKLWL-VAPP 202          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: W2NEC5_PHYPR (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NEC5_PHYPR)

HSP 1 Score: 98.6 bits (244), Expect = 1.150e-19
Identity = 70/175 (40.00%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   74 LSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADAARFQAAQGAPDRGVFRTPGDGEGELRV----DASVSEV---PGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAP 241
            L+P +LAF+K+ W D+   K     +   AKADK R + E      Q       +  + +    + E  V    DA + E     G FRM +  EA    K S T   VL H  Y G  VTKVL+RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:  145 LTPAELAFTKMTWHDLT--KEEKDAYTEKAKADKQRFLKELSEFLSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVGTEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 317          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A6G0XCR0_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCR0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.560e-19
Identity = 77/207 (37.20%), Postives = 100/207 (48.31%), Query Frame = 0
Query:   55 GFFQRKKDLLLRAVELGETLSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADA--------ARFQAA-QGAPDRG------VFRTPGDGE-------GELRVDASVSEVPGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRL 239
            G  QRK+     AV+ G TLSPE++ F +  W D+  D    + +H  A ADK+R  A+  A         R+    Q +P R          TP           G +  D   +     F+M +       GK S T   VL HG + G+ VTKVL+RP +GRRHQLRLH  H G+PI+GD TYG  D   PRM LHA  L L+ 
Sbjct:  223 GVVQRKQ-----AVD-GATLSPEEVDFLRKKWHDLPDD--VQQTYHERAAADKLRFDAQVKALECHQLPQVRYDIPLQSSPLRPRSMSELTLPTPKRSRLVTTEPMGYIFDDPIATSTTNSFQMEISPN----GKVSTTLAFVLGHGLFDGQPVTKVLLRPLSGRRHQLRLHLSHCGYPIVGDVTYGSEDDLAPRMMLHAWKLHLKF 417          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A0W8DGS8_PHYNI (RNA pseudouridylate synthase domain-containing protein 1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DGS8_PHYNI)

HSP 1 Score: 98.2 bits (243), Expect = 3.940e-19
Identity = 70/175 (40.00%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   74 LSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADAARFQAAQGAPDRGVFRTPGDGEGELRV----DASVSEV---PGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAP 241
            L+P +LAF+K+ W D+   K     +   AKADK R + E      Q       +  + +    + E  V    DA + E     G FRM +  EA    K S T   VL H  Y G  VTKVL+RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:  259 LTPAELAFTKMTWHDLT--KEEKDAYTEKAKADKQRFLKELSEFLSQEKVRLARKRNYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVGTEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 431          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: W2Q6J3_PHYPN (PseudoU_synth_2 domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2Q6J3_PHYPN)

HSP 1 Score: 98.2 bits (243), Expect = 4.290e-19
Identity = 70/175 (40.00%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   74 LSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADAARFQAAQGAPDRGVFRTPGDGEGELRV----DASVSEV---PGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAP 241
            L+P +LAF+K+ W D+   K     +   AKADK R + E      Q       +  + +    + E  V    DA + E     G FRM +  EA    K S T   VL H  Y G  VTKVL+RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:  278 LTPAELAFTKMTWHDLT--KEEKDAYTEKAKADKQRFLKELSEFLSQEKVRLARKRNYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVGTEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 450          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: M4BT04_HYAAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BT04_HYAAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.550e-19
Identity = 75/200 (37.50%), Postives = 99/200 (49.50%), Query Frame = 0
Query:   57 FQRKKDLLLRAVELGET-------LSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAEADA--ARFQAAQGAPDRGVFRTPGDGEGE---LRVDASVSEVPGD---FRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAP 241
            F  ++  LLR  + G+        L+P +LAF+K+ W D+  +K  +  +   AK DK R + E +A  ++ +A          R   D   E      DA + E       FRM++  E     K S T   VL H  YRG+ VTKVL+RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:  157 FTMEQARLLRESQKGDIAGARARELTPTELAFTKMAWIDLAKEKKDA--YTEKAKTDKQRFLCELNAFLSKEKARLACQRAYECRDNSDKVDEPVAYVFDAPIVEPHRSRKVFRMQVGSETDTSAKQSTTVAFVLGHAMYRGQPVTKVLLRPLNGRRHQLRLHLAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRERP 354          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A7S2RMN8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RMN8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.230e-18
Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 0
Query:  119 FQAAQGAPDRGVFRTPGDGEGELRVDASVSEVPGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYG 219
            F  ++G   R +    G     L V  ++S +P DFRMR+D     +G+ ++T V VLEHGS  G  VTKVL+RP  GRRHQLRLH LH+G+PILGD TYG
Sbjct:  158 FYTSEGGVVRDLLSDFGSSIPVLEVSGAISAIPDDFRMRIDPS---EGREAKTQVVVLEHGSLYGVDVTKVLLRPIQGRRHQLRLHCLHLGYPILGDATYG 255          
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Match: A0A3M6VLV3_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLV3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.430e-18
Identity = 74/193 (38.34%), Postives = 98/193 (50.78%), Query Frame = 0
Query:   59 RKKDLLLRAVELGETLSPEDLAFSKLNWGDIKFDKAASRPFHSAAKADKIRAVAE-ADAARFQAAQGAPDRGVFRTPGDGEGELR------VDASVSEV---PGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAP 241
            RK+D  + A EL    +P +LAF+K+ W ++   K     +   AKADK R + E ++    + ++ A  R   R+  D   E         DA + E     G FRM++  E     K S T   VL H  Y G+ VTKVL+RP  GRRHQLRLH  + G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:  255 RKRDAGVGACEL----TPVELAFTKMTWHELT--KEMKDAYTVKAKADKQRFLREFSEFLIKEKSRLAHKRQYERSDRDKSDETNEPVAYIFDAPILEPHRSTGVFRMQVGTETNASAKQSTTIAFVLGHAMYEGQPVTKVLLRPLNGRRHQLRLHLANHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 441          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1061.963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3V5_9PHAE2.280e-18993.39PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A7S2GNM4_9STRA5.210e-2458.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6YT03_9STRA9.120e-2038.73Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2NEC5_PHYPR1.150e-1940.00PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
A0A6G0XCR0_9STRA3.560e-1937.20PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A0W8DGS8_PHYNI3.940e-1940.00RNA pseudouridylate synthase domain-containing pro... [more]
W2Q6J3_PHYPN4.290e-1940.00PseudoU_synth_2 domain-containing protein n=16 Tax... [more]
M4BT04_HYAAE5.550e-1937.50PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A7S2RMN8_9STRA1.230e-1850.50Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A3M6VLV3_9STRA1.430e-1838.34PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 151..205
e-value: 5.6E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR21600:SF41RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 1coord: 1..253
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 1..253
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 142..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1061contigEcto-sp8_S_contig1061:15018..17421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1061.963.1mRNA_Ecto-sp8_S_contig1061.963.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1061 15018..17421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1061.963.1 ID=prot_Ecto-sp8_S_contig1061.963.1|Name=mRNA_Ecto-sp8_S_contig1061.963.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=329bp
KSYLAVVQGAVDPESVPRREEEPEGWGEGRDGTGGGGGGGRKRRPDSVQH
TPAHGFFQRKKDLLLRAVELGETLSPEDLAFSKLNWGDIKFDKAASRPFH
SAAKADKIRAVAEADAARFQAAQGAPDRGVFRTPGDGEGELRVDASVSEV
PGDFRMRLDKEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQ
LRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSDT
EAPAKQESGGGVVESAAAAAAVSTEGVSSQGGGGGGRGKRYWGRQEVQPA
GVAGGKQEVILDVVAPDPFVFVDGELQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf