prot_Ecto-sp8_S_contig1061.962.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig1061.962.1
Unique Name	prot_Ecto-sp8_S_contig1061.962.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	352

Homology

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BLAST of mRNA_Ecto-sp8_S_contig1061.962.1 vs. uniprot
Match: D7FMC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMC0_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 5.760e-222
Identity = 330/353 (93.48%), Postives = 336/353 (95.18%), Query Frame = 0

Query:    1 MSVAPVATVSPVFSDEPPTAVIVANEPVPAEGGGWISATSSPGAAGASAVVL-EEHAADVESGTRRPIPTRAAAAPAAGRPTADDVEKSCGLTSRRWHQLFALGIGLLEAAFSLDNAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLSLCRARVGEQDTVMEGFGSPLAILVNGVRQTDRSLTKTGHFGAMCQAAAVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLITNTVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALIALPVGVDVAEILFLFLGGQSWNATILALLDVGVTAVVVFPFGYKRFMTAFPEAARRLGLDSGRACDHY-CCCNLDTLLYVVFV 351
            MSVAPVATVSPVFSDEPPTAVI+ANEPVPAEGGGWISATSS            EEHAADVESGTRRPIPTRAAAAPAAG PTADDVEKSCGLTSRRWHQLFALGIGLLEAAFSL+NAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLSLCRARVGEQD VME FGSPLAILVNGVRQTDRSLTKTGHFGAMCQAA VAVTGLVLLQKVDARGFVILFYALLVLFCGFCL+TNTVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALIALP+GVDVAEILFLFLGGQSWNATILALLDVGVTA+VVFPFGYKRFMTAFPEAARRLGLDSGRACDHY CCCNL+TLLYVVFV
Sbjct:    1 MSVAPVATVSPVFSDEPPTAVILANEPVPAEGGGWISATSSXXXXXXXXXXXXEEHAADVESGTRRPIPTRAAAAPAAGGPTADDVEKSCGLTSRRWHQLFALGIGLLEAAFSLNNAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLSLCRARVGEQDAVMEEFGSPLAILVNGVRQTDRSLTKTGHFGAMCQAAVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTNTVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALIALPLGVDVAEILFLFLGGQSWNATILALLDVGVTAMVVFPFGYKRFMTAFPEAARRLGLDSGRACDHYYCCCNLETLLYVVFV 353

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig1061.962.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig1061.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FMC0_ECTSI	5.760e-222	93.48	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 292..312
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 208..218
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..187
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 243..261
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 219..242
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 286..291
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 188..207
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 313..351
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 262..285
None	No IPR available	TMHMM	TMhelix		coord: 263..285
None	No IPR available	TMHMM	TMhelix		coord: 214..236
None	No IPR available	TMHMM	TMhelix		coord: 290..312
None	No IPR available	TMHMM	TMhelix		coord: 188..207

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig1061	contig	Ecto-sp8_S_contig1061:12999..14054 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig1061.962.1	mRNA_Ecto-sp8_S_contig1061.962.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig1061 12943..14245 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig1061.962.1 ID=prot_Ecto-sp8_S_contig1061.962.1|Name=mRNA_Ecto-sp8_S_contig1061.962.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=352bp
MSVAPVATVSPVFSDEPPTAVIVANEPVPAEGGGWISATSSPGAAGASAV
VLEEHAADVESGTRRPIPTRAAAAPAAGRPTADDVEKSCGLTSRRWHQLF
ALGIGLLEAAFSLDNAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLS
LCRARVGEQDTVMEGFGSPLAILVNGVRQTDRSLTKTGHFGAMCQAAAVA
VTGLVLLQKVDARGFVILFYALLVLFCGFCLITNTVFCAGYFRNLVVVSR
LDSALDPDNPAVGLTYALIALPVGVDVAEILFLFLGGQSWNATILALLDV
GVTAVVVFPFGYKRFMTAFPEAARRLGLDSGRACDHYCCCNLDTLLYVVF
V*