prot_Ecto-sp8_S_contig10601.947.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10601.947.1
Unique Nameprot_Ecto-sp8_S_contig10601.947.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp8_S_contig10601.947.1 vs. uniprot
Match: A0A6H5JLH7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.100e-7
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    6 QSFHFLVDVAEYQDLLKVSSGDEHINDDFKHFVGIVKEYIKIGSNSEIIIACRTKTSIIELGERSAYASLCLEDRITVFNLAEKEIITMLAENLLNKFKATPD 108
            +S+ F+V   +Y++   +S  +E     +K F+ I +EY++  S  E+ I+ + +  ++ L +   ++SL  + R  V     KE++ ML ENLLNKFK TP+
Sbjct:  218 ESWDFIVAACKYEE---ISDPEEQ----YKMFLRITEEYLRPTSPQEVNISSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEVVRMLEENLLNKFKQTPE 313          
BLAST of mRNA_Ecto-sp8_S_contig10601.947.1 vs. uniprot
Match: D7G0P7_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P7_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 6.830e-7
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   40 IVKEYIKIGSNSEIIIACRTKTSIIELGERSAYASLCLEDRITVFNLAEKEIITMLAENLLNKFKAT 106
            +V EY+K G+ SEI I+  TK +I+EL +  A+ASL  + R  +F  AE+EI +ML +NL+ KF A+
Sbjct:  113 MVNEYVKDGAPSEINISSNTKHNIMELTKIEAFASLDQDARKLIFVKAEREIRSMLEDNLMAKFLAS 179          
BLAST of mRNA_Ecto-sp8_S_contig10601.947.1 vs. uniprot
Match: A0A6H5KD71_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD71_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.470e-6
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    6 QSFHFLVDVAEYQDLLKVSSGDEHINDDFKHFVGIVKEYIKIGSNSEIIIACRTKTSIIELGERSAYASLCLEDRITVFNLAEKEIITMLAENLLNKFKATPD 108
            +S+ F+V   +Y++   +S  +E     ++ F+ I +EY++  S  E+ I  + +  ++ L +   ++SL  + R  V     KEI+ ML ENLLNKFK TP+
Sbjct:  180 ESWDFIVAACKYEE---ISDPEEQ----YEMFLRITEEYLQPTSPQEVNIGSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEIVRMLEENLLNKFKQTPE 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10601.947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLH7_9PHAE3.100e-732.04RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0P7_ECTSI6.830e-746.27RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KD71_9PHAE1.470e-632.04RGS domain-containing protein n=3 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1850coord: 2..108
e-value: 8.6E-8
score: 33.9
IPR016137RGS domainPFAMPF00615RGScoord: 6..106
e-value: 1.5E-5
score: 25.2
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 8..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10601contigEcto-sp8_S_contig10601:1618..2179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10601.947.1mRNA_Ecto-sp8_S_contig10601.947.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10601 1618..2179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10601.947.1 ID=prot_Ecto-sp8_S_contig10601.947.1|Name=mRNA_Ecto-sp8_S_contig10601.947.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=108bp
CCSDTQSFHFLVDVAEYQDLLKVSSGDEHINDDFKHFVGIVKEYIKIGSN
SEIIIACRTKTSIIELGERSAYASLCLEDRITVFNLAEKEIITMLAENLL
NKFKATPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf