prot_Ecto-sp8_S_contig10506.795.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10506.795.1
Unique Nameprot_Ecto-sp8_S_contig10506.795.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length154
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10506.795.1 vs. uniprot
Match: D8LL23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL23_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 1.520e-64
Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0 
Query:   49 TRLPGGSSTTARRVRPSGLVRLRSSSDESNSEGEPWGWSADQSGREGDDGGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE 154
            +RLPGGSSTTARRVRPSGLVRLRSSSDESN EGEPWGWSADQSGREGDDGGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE
Sbjct:    4 SRLPGGSSTTARRVRPSGLVRLRSSSDESNFEGEPWGWSADQSGREGDDGGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE 109
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BLAST of mRNA_Ecto-sp8_S_contig10506.795.1 vs. uniprot
Match: A0A6H5KPD2_9PHAE (zinc_ribbon_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD2_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.390e-53
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0 
Query:   49 TRLPGGSSTTARRVRPSGLVRLRSSSDESNSEGEPWGWSADQSGREGDDGGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE 154
            +RLPGG+S  A RVR SG VRLRSSSDESNSEGEPWGWSADQSGREGDD GGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE
Sbjct:    4 SRLPGGTSKAACRVRSSGHVRLRSSSDESNSEGEPWGWSADQSGREGDDRGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVE 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10506.795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL23_ECTSI1.520e-6498.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPD2_9PHAE2.390e-5392.45zinc_ribbon_2 domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10506contigEcto-sp8_S_contig10506:3..2112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10506.795.1mRNA_Ecto-sp8_S_contig10506.795.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10506 3..2112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10506.795.1 ID=prot_Ecto-sp8_S_contig10506.795.1|Name=mRNA_Ecto-sp8_S_contig10506.795.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=154bp
MQNLRRPLIAYCVLHLAPSSAFLPGCRSVGRFAAQRCAGHWCGATSGTTR
LPGGSSTTARRVRPSGLVRLRSSSDESNSEGEPWGWSADQSGREGDDGGG
AGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYT
QPVE
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