prot_Ecto-sp8_S_contig105002.789.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig105002.789.1
Unique Nameprot_Ecto-sp8_S_contig105002.789.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A0U2VCR3_9MAXI (60S ribosomal protein L27 n=2 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2VCR3_9MAXI)

HSP 1 Score: 240 bits (613), Expect = 6.770e-80
Identity = 120/136 (88.24%), Postives = 129/136 (94.85%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMKAGKVVLLL GRYAGRKAV+VKPSDEGT+DKPFSHALVAGIDRYPRKVTKKMSKK+I KRSK+KPFLKVVNYNHV+PTRYSVDI FDK NINKE +KDP KKKKARNMVR KFEE+YK+GKNRWFFQKL+F
Sbjct:    1 MGKIMKAGKVVLLLSGRYAGRKAVVVKPSDEGTTDKPFSHALVAGIDRYPRKVTKKMSKKRITKRSKIKPFLKVVNYNHVLPTRYSVDIPFDKANINKETLKDPSKKKKARNMVRLKFEEKYKTGKNRWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: UPI000C7884DA (60S ribosomal protein L27-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7884DA)

HSP 1 Score: 239 bits (610), Expect = 1.940e-79
Identity = 117/136 (86.03%), Postives = 131/136 (96.32%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK GKVVLLL GRYAGRKAV+V+PSD+GTSDKPFSHALVAGIDRYPRKVTKKM+KKKIQ+RS +KPFLKVVNYNH+MPTRYSV+I+FDK N+NKE +KDPMKKKKARNMVRTKFEE+YK+GKNRWFFQKL+F
Sbjct:    1 MGKIMKTGKVVLLLSGRYAGRKAVVVRPSDDGTSDKPFSHALVAGIDRYPRKVTKKMNKKKIQRRSVIKPFLKVVNYNHLMPTRYSVEITFDKANLNKETLKDPMKKKKARNMVRTKFEEKYKTGKNRWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A553P9W1_TIGCA (60S ribosomal protein L27 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P9W1_TIGCA)

HSP 1 Score: 233 bits (595), Expect = 3.760e-77
Identity = 115/136 (84.56%), Postives = 129/136 (94.85%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK+GKVVL+L GR+AGRKAVIVKP+DEGT+DKPF HALVAGIDRYPR VTK+MSKKKI+ RSKVKPFLKVVNYNH+MPTRYSV++ FDK N+NKE +KDPMKKKKARNMVRT+FEERYKSGKNRWFFQKL+F
Sbjct:    1 MGKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALVAGIDRYPRMVTKRMSKKKIKMRSKVKPFLKVVNYNHLMPTRYSVELGFDKANLNKETLKDPMKKKKARNMVRTQFEERYKSGKNRWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A0U2M966_ACAPC (60S ribosomal protein L27 n=2 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2M966_ACAPC)

HSP 1 Score: 231 bits (590), Expect = 2.170e-76
Identity = 112/136 (82.35%), Postives = 130/136 (95.59%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKI+KAGKVVLLL GRYAGRKAV+VKP++EG+SDKPF HALVAGI+RYPRKVTK+M+KKK+QKRSK+KPFLKVVNYNHVMPTRYSVDI FDK+N+NKE++KDP KKK ARNMVR KFEE+YK+GKN+WFFQKL+F
Sbjct:    1 MGKIIKAGKVVLLLSGRYAGRKAVVVKPNEEGSSDKPFPHALVAGIERYPRKVTKRMNKKKVQKRSKIKPFLKVVNYNHVMPTRYSVDIPFDKSNLNKEVLKDPKKKKTARNMVRVKFEEKYKAGKNKWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A481SXL2_XIBTU (60S ribosomal protein L27 n=1 Tax=Xibalbanus tulumensis TaxID=1519145 RepID=A0A481SXL2_XIBTU)

HSP 1 Score: 218 bits (554), Expect = 6.680e-71
Identity = 107/136 (78.68%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK+GKVVL+LGGRYAGRKAVI++  DEG+SDK + HALVAGIDRYP KVTKKM+ +KI  +SK+KPFLKV+NYNH+MPTRYSVDISFDK  INK+++KDPMKKKKARN V+ KFEERYKSGKNRWFFQKL+F
Sbjct:    1 MGKIMKSGKVVLVLGGRYAGRKAVIIRNYDEGSSDKRYGHALVAGIDRYPHKVTKKMNNRKIALKSKIKPFLKVLNYNHLMPTRYSVDISFDKNGINKDVLKDPMKKKKARNAVKAKFEERYKSGKNRWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A0P5Z152_9CRUS (60S ribosomal protein L27 n=5 Tax=Daphnia TaxID=6668 RepID=A0A0P5Z152_9CRUS)

HSP 1 Score: 216 bits (550), Expect = 4.610e-70
Identity = 105/136 (77.21%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK+GKVVL+LGGR+AGRKA+IVK  DEGTS+KP+ HALVAG+DRYPRKVT KMSKKK+ KRSK+K F+K+VNYNH+MPTRYSVD+SFDK  +NK+ +KDP+K+KKAR  VRTKFEERYKSGKNRWFF KL+F
Sbjct:   17 MGKIMKSGKVVLVLGGRFAGRKAIIVKNYDEGTSEKPYGHALVAGVDRYPRKVTNKMSKKKVAKRSKIKAFVKIVNYNHMMPTRYSVDLSFDKNLVNKDSIKDPLKRKKARFAVRTKFEERYKSGKNRWFFSKLRF 152          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A0U2UU50_9MAXI (60S ribosomal protein L27 n=1 Tax=Tortanus dextrilobatus TaxID=207953 RepID=A0A0U2UU50_9MAXI)

HSP 1 Score: 215 bits (548), Expect = 5.480e-70
Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKI+K GKVVLLL GRYAGRKA +V P+DEG SDKPF HALV GIDRYPRKVTKKMSKKKI KRS +KPFLKVVNYNHVMPTRYSV++ FDKT +NKE +KDP KK+KARNMV+  FE  YKSGKN+WFFQKL+F
Sbjct:    1 MGKIIKEGKVVLLLSGRYAGRKACVVTPNDEGKSDKPFCHALVVGIDRYPRKVTKKMSKKKIAKRSSIKPFLKVVNYNHVMPTRYSVELRFDKTKLNKETLKDPNKKRKARNMVKQTFETSYKSGKNKWFFQKLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: A0A4Y2HUC9_ARAVE (60S ribosomal protein L27 n=8 Tax=Arachnida TaxID=6854 RepID=A0A4Y2HUC9_ARAVE)

HSP 1 Score: 213 bits (543), Expect = 5.030e-69
Identity = 102/136 (75.00%), Postives = 125/136 (91.91%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK GKVVL+L GRYAGRKAV+VK +DEGTSDKP+ HALVAGIDRYPRKVT++M KKK++KRSK+KPF+KV+NYNH+MPTRY VDI+FDK+ +NKE++KDP K++KAR  V+ KFEERYK+GK+RWFFQKL+F
Sbjct:   15 MGKIMKIGKVVLVLNGRYAGRKAVVVKNNDEGTSDKPYGHALVAGIDRYPRKVTRRMGKKKLEKRSKIKPFVKVLNYNHLMPTRYMVDIAFDKSIVNKEVLKDPSKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 150          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: C1BV54_LEPSM (60S ribosomal protein L27 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=C1BV54_LEPSM)

HSP 1 Score: 212 bits (540), Expect = 9.080e-69
Identity = 98/136 (72.06%), Postives = 126/136 (92.65%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIM++G++V++L GR+AGRKAVIV+P+DEG  +KPF HALVAG+DRYPRKVTK+MSKKK+++RSK+KPFLKV+NYNH+MPTRY+VDI FDK +INKE++KDPMKKKKAR +VR  FEE+YKSG ++WFFQ+L+F
Sbjct:    1 MGKIMRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 136          
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Match: C1BQQ7_CALRO (60S ribosomal protein L27 n=2 Tax=Caligus TaxID=217164 RepID=C1BQQ7_CALRO)

HSP 1 Score: 210 bits (535), Expect = 5.250e-68
Identity = 99/136 (72.79%), Postives = 122/136 (89.71%), Query Frame = 0
Query:    1 MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYPRKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 136
            MGKIMK+GKVV++L GRYAGRKAVIV+P+DEG  +KPF HAL+AG+DRYPRKVTK+MSKKK+++RSK+KPFLKV+NYNH+MP RY+VD  FDK  INKE++KDPMKKKKAR +VR  FE +YK+G N+WFFQKL+F
Sbjct:    1 MGKIMKSGKVVVVLSGRYAGRKAVIVRPTDEGNGEKPFGHALIAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHMMPARYTVDTKFDKEAINKEVLKDPMKKKKARQIVRNDFESKYKAGDNKWFFQKLRF 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105002.789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2VCR3_9MAXI6.770e-8088.2460S ribosomal protein L27 n=2 Tax=Pseudodiaptomus ... [more]
UPI000C7884DA1.940e-7986.0360S ribosomal protein L27-like n=1 Tax=Eurytemora ... [more]
A0A553P9W1_TIGCA3.760e-7784.5660S ribosomal protein L27 n=1 Tax=Tigriopus califo... [more]
A0A0U2M966_ACAPC2.170e-7682.3560S ribosomal protein L27 n=2 Tax=Acartia pacifica... [more]
A0A481SXL2_XIBTU6.680e-7178.6860S ribosomal protein L27 n=1 Tax=Xibalbanus tulum... [more]
A0A0P5Z152_9CRUS4.610e-7077.2160S ribosomal protein L27 n=5 Tax=Daphnia TaxID=66... [more]
A0A0U2UU50_9MAXI5.480e-7078.6860S ribosomal protein L27 n=1 Tax=Tortanus dextril... [more]
A0A4Y2HUC9_ARAVE5.030e-6975.0060S ribosomal protein L27 n=8 Tax=Arachnida TaxID=... [more]
C1BV54_LEPSM9.080e-6972.0660S ribosomal protein L27 n=2 Tax=Lepeophtheirus s... [more]
C1BQQ7_CALRO5.250e-6872.7960S ribosomal protein L27 n=2 Tax=Caligus TaxID=21... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 52..136
e-value: 4.5E-36
score: 123.1
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 1..136
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..136
e-value: 2.5E-66
score: 223.8
NoneNo IPR availablePANTHERPTHR10497:SF1160S RIBOSOMAL PROTEIN L27coord: 1..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePRODOMPD009396coord: 70..136
e-value: 5.0E-18
score: 218.0
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig105002contigEcto-sp8_S_contig105002:59..469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig105002.789.1mRNA_Ecto-sp8_S_contig105002.789.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig105002 59..469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig105002.789.1 ID=prot_Ecto-sp8_S_contig105002.789.1|Name=mRNA_Ecto-sp8_S_contig105002.789.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=137bp
MGKIMKAGKVVLLLGGRYAGRKAVIVKPSDEGTSDKPFSHALVAGIDRYP
RKVTKKMSKKKIQKRSKVKPFLKVVNYNHVMPTRYSVDISFDKTNINKEL
MKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001141Ribosomal_L27e
IPR038655L27e_sf
IPR008991Translation_prot_SH3-like_sf