prot_Ecto-sp8_S_contig104282.684.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig104282.684.1
Unique Nameprot_Ecto-sp8_S_contig104282.684.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2LGG4_9MAXI (60S ribosomal protein L32 n=5 Tax=Calanoida TaxID=6833 RepID=A0A0U2LGG4_9MAXI)

HSP 1 Score: 222 bits (566), Expect = 8.550e-73
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MALTPASRPKIVKKR KKFIRHQSDRYDK+K NWRRPKGIDNRVRRKF+GMYK+P IGYGS   T+HMMP+GFRKVL+HN+KELEVLMM NK + AEIA GVS+KNRK+L+ERA QLAIRVTNP+A++RSEENE
Sbjct:    1 MALTPASRPKIVKKRTKKFIRHQSDRYDKLKQNWRRPKGIDNRVRRKFRGMYKLPGIGYGSAKATKHMMPSGFRKVLVHNVKELEVLMMQNKKFCAEIAHGVSSKNRKNLVERAQQLAIRVTNPSAKVRSEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2US32_ACAPC (60S ribosomal protein L32 n=2 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2US32_ACAPC)

HSP 1 Score: 218 bits (554), Expect = 5.770e-71
Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MALTPA+RPKI+KKR K+FIRHQSDRY K+K NWR+PKGIDNRVRRKF+GMYKMP IGYGS   T+HM+PTGFRKVL+HN+KELEVLMM NK + AEIA GVSAKNRK+L+ERA QLAIRVTNP+AR+RSEENE
Sbjct:    1 MALTPANRPKILKKRTKRFIRHQSDRYIKLKPNWRKPKGIDNRVRRKFRGMYKMPGIGYGSAKATKHMLPTGFRKVLVHNVKELEVLMMQNKKFCAEIAHGVSAKNRKTLVERAQQLAIRVTNPHARLRSEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2V7Q5_9MAXI (60S ribosomal protein L32 n=1 Tax=Centropages tenuiremis TaxID=544689 RepID=A0A0U2V7Q5_9MAXI)

HSP 1 Score: 216 bits (549), Expect = 3.340e-70
Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MALTPASRPKIVKKR KKFIRHQSD Y K+K NWRRPKGIDNRVRRKF+GMYK+P IGYGSN  TRHM+PTGFRKVL++N+KELEVLMM NK Y AEIA GVS+KNRK+++ERA QLAIRVTN +A++RSEENE
Sbjct:    1 MALTPASRPKIVKKRTKKFIRHQSDWYHKLKTNWRRPKGIDNRVRRKFRGMYKLPGIGYGSNKATRHMLPTGFRKVLVNNLKELEVLMMQNKKYCAEIAHGVSSKNRKAIVERAQQLAIRVTNGSAKLRSEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A553NCB5_TIGCA (60S ribosomal protein L32 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NCB5_TIGCA)

HSP 1 Score: 216 bits (549), Expect = 3.340e-70
Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MA+TPA+ PKIVKKR K+F+RHQSDRY KV+ +WR+PKGIDNRVRRKFKGMY MPNIGYGSN  TRHM+PTGFRKVLI+N+KELEVLMM NK + AEIA GVSAKNRK+L+ERA QL IRVTNPNAR+RSEENE
Sbjct:    1 MAITPAAHPKIVKKRTKRFLRHQSDRYVKVRQSWRKPKGIDNRVRRKFKGMYLMPNIGYGSNKNTRHMLPTGFRKVLINNMKELEVLMMQNKKFCAEIAHGVSAKNRKALVERAQQLCIRVTNPNARLRSEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2T7P6_9MAXI (60S ribosomal protein L32 n=2 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2T7P6_9MAXI)

HSP 1 Score: 212 bits (540), Expect = 7.850e-69
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MALTPA RPKIVKKR K+F RHQSDRY K+K NWR+PKGIDNRVRRKFKGMY MPNIGYGS   TRHM+P+GFRKVLIHN+KELEVLMM NK + AEIA GVSAKNRK+++ERA QLAIR+TNP+A++R+EENE
Sbjct:    1 MALTPAERPKIVKKRTKQFTRHQSDRYVKLKRNWRKPKGIDNRVRRKFKGMYLMPNIGYGSAKATRHMLPSGFRKVLIHNMKELEVLMMQNKKFCAEIAHGVSAKNRKTIVERAQQLAIRITNPSAKMRTEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A6Q2XWB9_ESOLU (60S ribosomal protein L32 n=4 Tax=Protacanthopterygii TaxID=41705 RepID=A0A6Q2XWB9_ESOLU)

HSP 1 Score: 211 bits (536), Expect = 3.300e-68
Identity = 104/133 (78.20%), Postives = 120/133 (90.23%), Query Frame = 0
Query:    2 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            AL P  RPKIVKKRVKKFIRHQSDRY KVK NWR+P+GIDNRVRR+FKG   MPNIGYGSN+ T+HM+P+GFRK L+HNI+ELEVLMMSNKT+AAEIA  VS+KNRK ++ERAAQLAI++TNPNAR+RSEENE
Sbjct:    3 ALRPLQRPKIVKKRVKKFIRHQSDRYVKVKQNWRKPRGIDNRVRRRFKGQMLMPNIGYGSNNNTKHMLPSGFRKFLVHNIRELEVLMMSNKTHAAEIAHNVSSKNRKLIVERAAQLAIKITNPNARLRSEENE 135          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A8C4XF28_ERPCA (Ribosomal protein L32 n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A8C4XF28_ERPCA)

HSP 1 Score: 207 bits (528), Expect = 5.470e-67
Identity = 101/133 (75.94%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    2 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            AL P ++PKIVKKR KKFIRHQSDRY K+K NWR+P+GIDNRVRR+FKG   MPNIGYGSN  T+HM+P+GFRK L+HNIKELEVL+MSNK+Y AEIA  VS+KNRK+++ERAAQLAI+VTNPNAR+RSEENE
Sbjct:    3 ALRPLTKPKIVKKRTKKFIRHQSDRYVKIKKNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNIKELEVLLMSNKSYCAEIAHNVSSKNRKAIVERAAQLAIKVTNPNARLRSEENE 135          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A1S3HVD9_LINUN (60S ribosomal protein L32 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HVD9_LINUN)

HSP 1 Score: 207 bits (527), Expect = 7.520e-67
Identity = 103/134 (76.87%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            MAL P  +PKIVKKR KKFIRHQSDRY K+K NWR+PKGIDNRVRR+FKG Y MPNIGYGSN  T+HMMP GF+K L+HN+ ELEVLMM NKT+AAEIA  VSAK RKS++ERA QLAI+VTNPNAR+RSEENE
Sbjct:    1 MALRPLCKPKIVKKRTKKFIRHQSDRYLKLKPNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKKTKHMMPDGFKKFLVHNVAELEVLMMQNKTFAAEIASSVSAKKRKSIVERAQQLAIKVTNPNARLRSEENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A6M2DKK4_9NEOP (60S ribosomal protein L32 n=3 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DKK4_9NEOP)

HSP 1 Score: 207 bits (527), Expect = 7.520e-67
Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            M++ P  RPKIVKKR KKFIRHQSDRYDK+K NWR+PKGIDNRVRR+FKG Y MPNIGYGSNS TRHM+PTGF KVL+HN +ELE+LMM N+TY AEIA GVS+K RK + ERA QL+IRVTN NAR+RS+ENE
Sbjct:    1 MSIRPVYRPKIVKKRTKKFIRHQSDRYDKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNSKTRHMLPTGFHKVLVHNTRELEILMMQNRTYCAEIAHGVSSKKRKEITERAKQLSIRVTNGNARLRSQENE 134          
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A091IU71_EGRGA (60S ribosomal protein L32 n=65 Tax=Aves TaxID=8782 RepID=A0A091IU71_EGRGA)

HSP 1 Score: 207 bits (527), Expect = 7.770e-67
Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    2 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 134
            AL P  +PKIVKKR KKFIRHQSDRY K+K NWR+P+GIDNRVRR+FKG   MPNIGYGSN  T+HM+PTGFRK L+HN+KELEVLMMSNK+Y AEIA  VS+KNRK ++ERAAQLAI++TNPNAR+RSEENE
Sbjct:    3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPTGFRKFLVHNVKELEVLMMSNKSYCAEIAHNVSSKNRKIIVERAAQLAIKITNPNARLRSEENE 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2LGG4_9MAXI8.550e-7381.3460S ribosomal protein L32 n=5 Tax=Calanoida TaxID=... [more]
A0A0U2US32_ACAPC5.770e-7179.8560S ribosomal protein L32 n=2 Tax=Acartia pacifica... [more]
A0A0U2V7Q5_9MAXI3.340e-7079.8560S ribosomal protein L32 n=1 Tax=Centropages tenu... [more]
A0A553NCB5_TIGCA3.340e-7079.8560S ribosomal protein L32 n=1 Tax=Tigriopus califo... [more]
A0A0U2T7P6_9MAXI7.850e-6978.3660S ribosomal protein L32 n=2 Tax=Pseudodiaptomus ... [more]
A0A6Q2XWB9_ESOLU3.300e-6878.2060S ribosomal protein L32 n=4 Tax=Protacanthoptery... [more]
A0A8C4XF28_ERPCA5.470e-6775.94Ribosomal protein L32 n=3 Tax=Euteleostomi TaxID=1... [more]
A0A1S3HVD9_LINUN7.520e-6776.8760S ribosomal protein L32 n=1 Tax=Lingula unguis T... [more]
A0A6M2DKK4_9NEOP7.520e-6775.3760S ribosomal protein L32 n=3 Tax=Pulicidae TaxID=... [more]
A0A091IU71_EGRGA7.770e-6775.9460S ribosomal protein L32 n=65 Tax=Aves TaxID=8782... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..134
NoneNo IPR availablePANTHERPTHR23413:SF360S RIBOSOMAL PROTEIN L32coord: 2..134
NoneNo IPR availablePRODOMPD003823coord: 22..123
e-value: 1.0E-43
score: 439.0
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 16..123
e-value: 5.4E-71
score: 251.8
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 17..123
e-value: 4.8E-51
score: 171.7
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 2..134
IPR018263Ribosomal protein L32e, conserved sitePROSITEPS00580RIBOSOMAL_L32Ecoord: 19..39
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig104282contigEcto-sp8_S_contig104282:55..459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig104282.684.1mRNA_Ecto-sp8_S_contig104282.684.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig104282 55..459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig104282.684.1 ID=prot_Ecto-sp8_S_contig104282.684.1|Name=mRNA_Ecto-sp8_S_contig104282.684.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=135bp
MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKG
MYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIAR
GVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR018263Ribosomal_L32e_CS
IPR036351Ribosomal_L32e_sf