mRNA_Ecto-sp8_S_contig104282.684.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2LGG4_9MAXI (60S ribosomal protein L32 n=5 Tax=Calanoida TaxID=6833 RepID=A0A0U2LGG4_9MAXI) HSP 1 Score: 222 bits (566), Expect = 8.550e-73 Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MALTPASRPKIVKKR KKFIRHQSDRYDK+K NWRRPKGIDNRVRRKF+GMYK+P IGYGS T+HMMP+GFRKVL+HN+KELEVLMM NK + AEIA GVS+KNRK+L+ERA QLAIRVTNP+A++RSEENE
Sbjct: 1 MALTPASRPKIVKKRTKKFIRHQSDRYDKLKQNWRRPKGIDNRVRRKFRGMYKLPGIGYGSAKATKHMMPSGFRKVLVHNVKELEVLMMQNKKFCAEIAHGVSSKNRKNLVERAQQLAIRVTNPSAKVRSEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2US32_ACAPC (60S ribosomal protein L32 n=2 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2US32_ACAPC) HSP 1 Score: 218 bits (554), Expect = 5.770e-71 Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MALTPA+RPKI+KKR K+FIRHQSDRY K+K NWR+PKGIDNRVRRKF+GMYKMP IGYGS T+HM+PTGFRKVL+HN+KELEVLMM NK + AEIA GVSAKNRK+L+ERA QLAIRVTNP+AR+RSEENE
Sbjct: 1 MALTPANRPKILKKRTKRFIRHQSDRYIKLKPNWRKPKGIDNRVRRKFRGMYKMPGIGYGSAKATKHMLPTGFRKVLVHNVKELEVLMMQNKKFCAEIAHGVSAKNRKTLVERAQQLAIRVTNPHARLRSEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2V7Q5_9MAXI (60S ribosomal protein L32 n=1 Tax=Centropages tenuiremis TaxID=544689 RepID=A0A0U2V7Q5_9MAXI) HSP 1 Score: 216 bits (549), Expect = 3.340e-70 Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MALTPASRPKIVKKR KKFIRHQSD Y K+K NWRRPKGIDNRVRRKF+GMYK+P IGYGSN TRHM+PTGFRKVL++N+KELEVLMM NK Y AEIA GVS+KNRK+++ERA QLAIRVTN +A++RSEENE
Sbjct: 1 MALTPASRPKIVKKRTKKFIRHQSDWYHKLKTNWRRPKGIDNRVRRKFRGMYKLPGIGYGSNKATRHMLPTGFRKVLVNNLKELEVLMMQNKKYCAEIAHGVSSKNRKAIVERAQQLAIRVTNGSAKLRSEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A553NCB5_TIGCA (60S ribosomal protein L32 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NCB5_TIGCA) HSP 1 Score: 216 bits (549), Expect = 3.340e-70 Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MA+TPA+ PKIVKKR K+F+RHQSDRY KV+ +WR+PKGIDNRVRRKFKGMY MPNIGYGSN TRHM+PTGFRKVLI+N+KELEVLMM NK + AEIA GVSAKNRK+L+ERA QL IRVTNPNAR+RSEENE
Sbjct: 1 MAITPAAHPKIVKKRTKRFLRHQSDRYVKVRQSWRKPKGIDNRVRRKFKGMYLMPNIGYGSNKNTRHMLPTGFRKVLINNMKELEVLMMQNKKFCAEIAHGVSAKNRKALVERAQQLCIRVTNPNARLRSEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A0U2T7P6_9MAXI (60S ribosomal protein L32 n=2 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2T7P6_9MAXI) HSP 1 Score: 212 bits (540), Expect = 7.850e-69 Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MALTPA RPKIVKKR K+F RHQSDRY K+K NWR+PKGIDNRVRRKFKGMY MPNIGYGS TRHM+P+GFRKVLIHN+KELEVLMM NK + AEIA GVSAKNRK+++ERA QLAIR+TNP+A++R+EENE
Sbjct: 1 MALTPAERPKIVKKRTKQFTRHQSDRYVKLKRNWRKPKGIDNRVRRKFKGMYLMPNIGYGSAKATRHMLPSGFRKVLIHNMKELEVLMMQNKKFCAEIAHGVSAKNRKTIVERAQQLAIRITNPSAKMRTEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A6Q2XWB9_ESOLU (60S ribosomal protein L32 n=4 Tax=Protacanthopterygii TaxID=41705 RepID=A0A6Q2XWB9_ESOLU) HSP 1 Score: 211 bits (536), Expect = 3.300e-68 Identity = 104/133 (78.20%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 4 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
AL P RPKIVKKRVKKFIRHQSDRY KVK NWR+P+GIDNRVRR+FKG MPNIGYGSN+ T+HM+P+GFRK L+HNI+ELEVLMMSNKT+AAEIA VS+KNRK ++ERAAQLAI++TNPNAR+RSEENE
Sbjct: 3 ALRPLQRPKIVKKRVKKFIRHQSDRYVKVKQNWRKPRGIDNRVRRRFKGQMLMPNIGYGSNNNTKHMLPSGFRKFLVHNIRELEVLMMSNKTHAAEIAHNVSSKNRKLIVERAAQLAIKITNPNARLRSEENE 135
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A8C4XF28_ERPCA (Ribosomal protein L32 n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A8C4XF28_ERPCA) HSP 1 Score: 207 bits (528), Expect = 5.470e-67 Identity = 101/133 (75.94%), Postives = 119/133 (89.47%), Query Frame = 1
Query: 4 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
AL P ++PKIVKKR KKFIRHQSDRY K+K NWR+P+GIDNRVRR+FKG MPNIGYGSN T+HM+P+GFRK L+HNIKELEVL+MSNK+Y AEIA VS+KNRK+++ERAAQLAI+VTNPNAR+RSEENE
Sbjct: 3 ALRPLTKPKIVKKRTKKFIRHQSDRYVKIKKNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNIKELEVLLMSNKSYCAEIAHNVSSKNRKAIVERAAQLAIKVTNPNARLRSEENE 135
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A1S3HVD9_LINUN (60S ribosomal protein L32 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HVD9_LINUN) HSP 1 Score: 207 bits (527), Expect = 7.520e-67 Identity = 103/134 (76.87%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
MAL P +PKIVKKR KKFIRHQSDRY K+K NWR+PKGIDNRVRR+FKG Y MPNIGYGSN T+HMMP GF+K L+HN+ ELEVLMM NKT+AAEIA VSAK RKS++ERA QLAI+VTNPNAR+RSEENE
Sbjct: 1 MALRPLCKPKIVKKRTKKFIRHQSDRYLKLKPNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKKTKHMMPDGFKKFLVHNVAELEVLMMQNKTFAAEIASSVSAKKRKSIVERAQQLAIKVTNPNARLRSEENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A6M2DKK4_9NEOP (60S ribosomal protein L32 n=3 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DKK4_9NEOP) HSP 1 Score: 207 bits (527), Expect = 7.520e-67 Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 1 MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
M++ P RPKIVKKR KKFIRHQSDRYDK+K NWR+PKGIDNRVRR+FKG Y MPNIGYGSNS TRHM+PTGF KVL+HN +ELE+LMM N+TY AEIA GVS+K RK + ERA QL+IRVTN NAR+RS+ENE
Sbjct: 1 MSIRPVYRPKIVKKRTKKFIRHQSDRYDKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNSKTRHMLPTGFHKVLVHNTRELEILMMQNRTYCAEIAHGVSSKKRKEITERAKQLSIRVTNGNARLRSQENE 134
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Match: A0A091IU71_EGRGA (60S ribosomal protein L32 n=65 Tax=Aves TaxID=8782 RepID=A0A091IU71_EGRGA) HSP 1 Score: 207 bits (527), Expect = 7.770e-67 Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 4 ALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGMYKMPNIGYGSNSTTRHMMPTGFRKVLIHNIKELEVLMMSNKTYAAEIARGVSAKNRKSLIERAAQLAIRVTNPNARIRSEENE 402
AL P +PKIVKKR KKFIRHQSDRY K+K NWR+P+GIDNRVRR+FKG MPNIGYGSN T+HM+PTGFRK L+HN+KELEVLMMSNK+Y AEIA VS+KNRK ++ERAAQLAI++TNPNAR+RSEENE
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPTGFRKFLVHNVKELEVLMMSNKSYCAEIAHNVSSKNRKIIVERAAQLAIKITNPNARLRSEENE 135 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104282.684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig104282.684.1 >prot_Ecto-sp8_S_contig104282.684.1 ID=prot_Ecto-sp8_S_contig104282.684.1|Name=mRNA_Ecto-sp8_S_contig104282.684.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=135bp MALTPASRPKIVKKRVKKFIRHQSDRYDKVKCNWRRPKGIDNRVRRKFKGback to top mRNA from alignment at Ecto-sp8_S_contig104282:55..459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig104282.684.1 ID=mRNA_Ecto-sp8_S_contig104282.684.1|Name=mRNA_Ecto-sp8_S_contig104282.684.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=405bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104282:55..459- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104282:55..459- >mRNA_Ecto-sp8_S_contig104282.684.1 ID=mRNA_Ecto-sp8_S_contig104282.684.1|Name=mRNA_Ecto-sp8_S_contig104282.684.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104282:55..459- (Ectocarpus species8 EcLAC_412)back to top |