prot_Ecto-sp8_S_contig1041.668.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1041.668.1
Unique Nameprot_Ecto-sp8_S_contig1041.668.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length385
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1041.668.1 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI)

HSP 1 Score: 654 bits (1687), Expect = 9.700e-236
Identity = 343/361 (95.01%), Postives = 349/361 (96.68%), Query Frame = 0 
Query:   25 MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCAARGVRPTSATTSHAGASPSGSSAPKTGADGSXAGSATSSSPSVVVTQAVEGSKHPVGGFANGALIPLAAEGGNSSGAEGAT-VRVDKWGEASEGNLAGEFEWEGGAEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGGEGGSGREGGELMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 384
            MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCA RGVRPTSATTSHAGASPSGSS PKTGA+G  AGSATSSSPS VVTQAVEGS+HP GGFANGALIPL+ EGG+SSGAEGAT VRV KWGEA+EGNLAGEFEWEGGAEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGG EGGS RE GE+MAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI
Sbjct:    1 MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCAVRGVRPTSATTSHAGASPSGSSTPKTGANGPGAGSATSSSPSAVVTQAVEGSEHPAGGFANGALIPLSTEGGSSSGAEGATAVRVGKWGEAAEGNLAGEFEWEGGAEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGAEGGSRRERGEVMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 361
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BLAST of mRNA_Ecto-sp8_S_contig1041.668.1 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA)

HSP 1 Score: 199 bits (507), Expect = 8.710e-59
Identity = 106/218 (48.62%), Postives = 137/218 (62.84%), Query Frame = 0 
Query:  187 AEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGGEGGSGREGGELM--------------AGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETD------LVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 384
            A+  WTEFEDWLLQDT++RYAIGSGKHVLW RMV EVPEL+ RTPQEAR RWL +TGRL+         R+GG                 +G+P ++ FY+QPP+L  WEE+ +G    SF G+V G  GLADG  + T  +D++GR++ DQYV T+CG V+ELG RR  D       ++  +S     AP   LA A A    T L+HH+Q+EVFV+
Sbjct:   22 ADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLT-------DQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDG----SFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1041.668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8N9_ECTSI9.700e-23695.01Myb-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN06_9STRA8.710e-5948.62Myb-like domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..384
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 188..242
score: 6.934

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1041contigEcto-sp8_S_contig1041:4560..8791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1041.668.1mRNA_Ecto-sp8_S_contig1041.668.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1041 4395..9355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1041.668.1 ID=prot_Ecto-sp8_S_contig1041.668.1|Name=mRNA_Ecto-sp8_S_contig1041.668.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=385bp
MVMFKNRSTAVAAALLLAHHRHGNMPPLAAGFVAPTPIAAQPQRRLPPWC
EPVSFPPAWDSSRPVPASSKPPASNCNYRSCAARGVRPTSATTSHAGASP
SGSSAPKTGADGSGAGSATSSSPSVVVTQAVEGSKHPVGGFANGALIPLA
AEGGNSSGAEGATVRVDKWGEASEGNLAGEFEWEGGAEAAWTEFEDWLLQ
DTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGG
EGGSGREGGELMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQ
RGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASS
KMLKIAPATVLALAGAFYALTALSHHIQVEVFVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom