prot_Ecto-sp8_S_contig10403.654.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig10403.654.1
Unique Name	prot_Ecto-sp8_S_contig10403.654.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	419

Homology

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BLAST of mRNA_Ecto-sp8_S_contig10403.654.1 vs. uniprot
Match: D8LME4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME4_ECTSI)

HSP 1 Score: 570 bits (1468), Expect = 2.260e-187
Identity = 307/323 (95.05%), Postives = 308/323 (95.36%), Query Frame = 0

Query:   91 EWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEPVLL-FEDETVEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEAALSVAEKHQQQLEAAAAATVG---ADGGTGDGGRVSAVMDVVNQVNRVGDLKLSLDERMETLKRVRSRLESVRREANAERTAQSEKARFEAHRPSRWVPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAWMVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ 409
            EWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEPVLL FEDE VEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEAALSVAEKHQQQLEAA         ADGGTGDGGRVSAVMDV NQVNRVGDLKLSLDER+ETLKRVRSRL SVRREANAERTAQSEKARFEAHRPSR VPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAWMVVATPLRPWCGGG AKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ
Sbjct:  630 EWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEPVLLLFEDEAVEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEAALSVAEKHQQQLEAAXXXXXXXXXADGGTGDGGRVSAVMDVFNQVNRVGDLKLSLDERVETLKRVRSRLGSVRREANAERTAQSEKARFEAHRPSR-VPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAWMVVATPLRPWCGGGAAKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ 951

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BLAST of mRNA_Ecto-sp8_S_contig10403.654.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 9.710e-184
Identity = 305/320 (95.31%), Postives = 310/320 (96.88%), Query Frame = 0

Query:   90 SEWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEPVLLFEDETVEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEAALSVAEKHQQQLEAAAAATVGADGGTGDGGRVSAVMDVVNQVNRVGDLKLSLDERMETLKRVRSRLESVRREANAERTAQSEKARFEAHRPSRWVPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAWMVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ 409
            SEWEEGEPTDFVYTGLFPGEAKGWGGR+G EEEPVLLFEDETVEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEA+LSVAEKHQQQLEA A      DGGTGDGGRVSAVMDVVNQVNRVGDLKLSLDER+ETLKRVRSRLESVRREANAERT QSEKARFEAHRPSR VPPAPSRFDMVASGVTIRSYRSASLVAE+LSLRAWMVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALD+TVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ
Sbjct: 1630 SEWEEGEPTDFVYTGLFPGEAKGWGGRQGGEEEPVLLFEDETVEDGQALERLVARESELMSQEDQESAAERKTRAELVTAEASLSVAEKHQQQLEATA------DGGTGDGGRVSAVMDVVNQVNRVGDLKLSLDERVETLKRVRSRLESVRREANAERTVQSEKARFEAHRPSR-VPPAPSRFDMVASGVTIRSYRSASLVAENLSLRAWMVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALDLTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQ 1942

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig10403.654.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig10403.654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LME4_ECTSI	2.260e-187	95.05	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K463_9PHAE	9.710e-184	95.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 223..250

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig10403	contig	Ecto-sp8_S_contig10403:2545..6390 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig10403.654.1	mRNA_Ecto-sp8_S_contig10403.654.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig10403 2545..6390 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig10403.654.1 ID=prot_Ecto-sp8_S_contig10403.654.1|Name=mRNA_Ecto-sp8_S_contig10403.654.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=419bp
FPPTDPPALPLPATPAPTPTTRRRKPHHPLRGHKKKKKRWHQWRLAVRGG
VTAGHRRSGLREAEGSRPGSGPWGGRDGCRRRGGEDGEGSEWEEGEPTDF
VYTGLFPGEAKGWGGREGEEEEPVLLFEDETVEDGQALERLVARESELMS
QEDQESAAERKTRAELVTAEAALSVAEKHQQQLEAAAAATVGADGGTGDG
GRVSAVMDVVNQVNRVGDLKLSLDERMETLKRVRSRLESVRREANAERTA
QSEKARFEAHRPSRWVPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAW
MVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLI
DELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRD
PLEGRRTAQVCADFFFLL*