prot_Ecto-sp8_S_contig104.643.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig104.643.1
Unique Nameprot_Ecto-sp8_S_contig104.643.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp8_S_contig104.643.1 vs. uniprot
Match: D8LRL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRL0_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 3.140e-151
Identity = 280/299 (93.65%), Postives = 283/299 (94.65%), Query Frame = 0 
Query:    1 MRASGWKGWMLLGLGACGEAFVVRPLVHLPTSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPGDXXXXXXXXXXXVVFVPEVANNQLSSEAVEVDEISGRRLIVEFKAFGYFKRTCQLELLKSGDCVFSKGMVAKEKGAWRVEEEDGTDYLQFSCPLTEMYGVMFDVPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEGSFKARVLANDEEFPVPDKIDFSSVPIPAGLAKLKKKGTGGITEQVPEPPLPGSR 299
            MRASGWKGWMLLGLGACGEAFVVRPLVHLPTSSGSA XXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  APKPGD  XXXXXXXXXVVFVPEV NNQL+SEAVEVDEISGRRLIVEFKAFGYFKRTCQLELLKSGDCVFSKGMVAKEKGAWRVEEE+GTDYLQFSCPLTEMYGVMFDVPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEG+FKARVLANDEEFPVPDKIDFSSVPIPAGLAKLKKKG GGI EQVPEPPLPGSR
Sbjct:    1 MRASGWKGWMLLGLGACGEAFVVRPLVHLPTSSGSASXXXXXXXXXXXVPARCSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAPKPGDPSXXXXXXXXXVVFVPEVTNNQLTSEAVEVDEISGRRLIVEFKAFGYFKRTCQLELLKSGDCVFSKGMVAKEKGAWRVEEEEGTDYLQFSCPLTEMYGVMFDVPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEGTFKARVLANDEEFPVPDKIDFSSVPIPAGLAKLKKKGKGGIMEQVPEPPLPGSR 299
[Close]
BLAST of mRNA_Ecto-sp8_S_contig104.643.1 vs. uniprot
Match: A0A7S1TVR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVR3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.420e-17
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0 
Query:  169 KEKGAWRVEEEDGTDYLQFSCPLTEMYGVMFDVPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEGSFKARVLANDEE 257
            ++ G WRVE E+G DYLQ   P  E+Y  ++++    LFWR  L+K A+G++    G+IISEK SL GLKT F+ EG+FK   L + +E
Sbjct:    2 EQPGPWRVETEEGIDYLQVIMPTKEIYRELYNIKGDDLFWRAELQKDAEGNITGVDGKIISEKKSLLGLKTDFVLEGTFKMTPLTDQKE 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104.643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRL0_ECTSI3.140e-15193.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TVR3_9STRA1.420e-1746.07Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig104contigEcto-sp8_S_contig104:3619..9176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig104.643.1mRNA_Ecto-sp8_S_contig104.643.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig104 3095..9209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig104.643.1 ID=prot_Ecto-sp8_S_contig104.643.1|Name=mRNA_Ecto-sp8_S_contig104.643.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=300bp
MRASGWKGWMLLGLGACGEAFVVRPLVHLPTSSGSASTTTTITTPGGAVP
ARCSRGPQQQKQRRDRAATALASSQPSMMQDERQQQGFAAKVAPKPGDAS
EEEAKKAAAVVFVPEVANNQLSSEAVEVDEISGRRLIVEFKAFGYFKRTC
QLELLKSGDCVFSKGMVAKEKGAWRVEEEDGTDYLQFSCPLTEMYGVMFD
VPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEGSFKAR
VLANDEEFPVPDKIDFSSVPIPAGLAKLKKKGTGGITEQVPEPPLPGSR*
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