prot_Ecto-sp8_S_contig103890.632.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103890.632.1
Unique Nameprot_Ecto-sp8_S_contig103890.632.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.780e-31
Identity = 62/65 (95.38%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVE 65
            GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEK   E
Sbjct:  533 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKAAKE 597          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: A0A835ZI00_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI00_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.650e-23
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARR-GPMAIDEDDELHVYVSGETEEAVEKVRVE 65
            GLIIGPRGNTQKRMERE+ CKIAIRG+GSVKEGARR G  ++DE+D+LHVYV G+TEE VEK   E
Sbjct:  365 GLIIGPRGNTQKRMERESGCKIAIRGRGSVKEGARRTGVKSVDEEDDLHVYVQGDTEEQVEKAAAE 430          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: W2RB66_PHYPN (Branchpoint-bridging protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RB66_PHYPN)

HSP 1 Score: 91.7 bits (226), Expect = 3.350e-20
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV ++G+ EE ++K   E   L
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSL 348          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: A0A484DSZ3_BRELC (Branchpoint-bridging protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSZ3_BRELC)

HSP 1 Score: 92.0 bits (227), Expect = 3.910e-20
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV ++G+ E+ +E+   E   L
Sbjct:  282 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMIADENDDLHVLITGDREDEIERAAKEVQSL 350          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: W2LI46_PHYPR (Branchpoint-bridging protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LI46_PHYPR)

HSP 1 Score: 91.7 bits (226), Expect = 5.190e-20
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV ++G+ EE ++K   E   L
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSL 348          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: D0N463_PHYIT (Branchpoint-bridging protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N463_PHYIT)

HSP 1 Score: 91.7 bits (226), Expect = 5.340e-20
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV ++G+ EE ++K   E   L
Sbjct:  281 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSL 349          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: W2RDP1_PHYPN (Branchpoint-bridging protein n=22 Tax=Phytophthora TaxID=4783 RepID=W2RDP1_PHYPN)

HSP 1 Score: 91.7 bits (226), Expect = 5.340e-20
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV ++G+ EE ++K   E   L
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSL 348          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: A0A0P1B7W4_PLAHL (Branchpoint-bridging protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7W4_PLAHL)

HSP 1 Score: 91.3 bits (225), Expect = 7.310e-20
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKVRVEALML 69
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++   M  DE+D+LHV + G+ E+ +E+   E   L
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMLADENDDLHVLIMGDREDEIERAAKEVQSL 348          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: A0A7S2B291_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B291_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.910e-20
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEK 61
            GLIIGPRGNTQK+ME+E+ CKI+IRGKGSVK GAR GP   DE+DELHV ++G+T+E  ++
Sbjct:   36 GLIIGPRGNTQKKMEKESGCKISIRGKGSVKSGAR-GPAKGDEEDELHVLITGDTDEQADR 95          
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Match: D8TRS8_VOLCA (Branchpoint-bridging protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRS8_VOLCA)

HSP 1 Score: 85.1 bits (209), Expect = 1.360e-19
Identity = 45/65 (69.23%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEG-ARRGPMAIDE---DDELHVYVSGETEEAVEK 61
            GLIIGPRGNTQKRME+ET+ KIAIRGKGS+KEG  RR PM   E   DDELHV ++G+T+E V+K
Sbjct:   39 GLIIGPRGNTQKRMEKETNTKIAIRGKGSIKEGRTRRDPMGRPEPGEDDELHVLITGDTDEDVDK 103          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103890.632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0E9_ECTSI1.780e-3195.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZI00_9STRA3.650e-2375.76Branchpoint-bridging protein (Fragment) n=1 Tax=Tr... [more]
W2RB66_PHYPN3.350e-2065.22Branchpoint-bridging protein n=8 Tax=Phytophthora ... [more]
A0A484DSZ3_BRELC3.910e-2063.77Branchpoint-bridging protein n=1 Tax=Bremia lactuc... [more]
W2LI46_PHYPR5.190e-2065.22Branchpoint-bridging protein n=6 Tax=Phytophthora ... [more]
D0N463_PHYIT5.340e-2065.22Branchpoint-bridging protein n=2 Tax=Phytophthora ... [more]
W2RDP1_PHYPN5.340e-2065.22Branchpoint-bridging protein n=22 Tax=Phytophthora... [more]
A0A0P1B7W4_PLAHL7.310e-2063.77Branchpoint-bridging protein n=1 Tax=Plasmopara ha... [more]
A0A7S2B291_9STRA7.910e-2067.21Branchpoint-bridging protein (Fragment) n=1 Tax=Fl... [more]
D8TRS8_VOLCA1.360e-1969.23Branchpoint-bridging protein n=1 Tax=Volvox carter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1..63
e-value: 1.8E-8
score: 34.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..69
e-value: 5.3E-23
score: 84.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1..66
IPR031150BBP/SF1 familyPANTHERPTHR11208:SF45SPLICING FACTOR 1coord: 1..61
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 1..61
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..66
score: 11.007

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103890contigEcto-sp8_S_contig103890:43..252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103890.632.1mRNA_Ecto-sp8_S_contig103890.632.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103890 43..252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103890.632.1 ID=prot_Ecto-sp8_S_contig103890.632.1|Name=mRNA_Ecto-sp8_S_contig103890.632.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=70bp
GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVY
VSGETEEAVEKVRVEALMLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR031150BBP/SF1